CultureMech

Microbial growth-media knowledge base — curated culture-media recipes from MediaDive, JCM, KOMODO and more.

15,910normalized records
6,320merged records
5populated categories
512-Dv3 embeddings

Record browser

Faceted search across every media recipe — filter by category, medium type, physical state, target organism, and key ingredients.

Embedding browser

Interactive PaCMAP of media similarity from KG-Microbe deepwalk embeddings — derived (aggregated from ingredient embeddings) and direct (the medium's own graph-node embedding).

GitHub

Source code, data, schema, and the curation workflow.