Overview
- External ontology
- mediadive.medium:J659 (source link unavailable) — PELAGICOCCUS AGAR
- Applications
-
- Microbial cultivation
- pH
- 7.5
- Notes
- Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=659
Composition
flowchart LR
CultureMech_003004["pelagicoccus_agar"]
ing0_Marine_agar_2216["Marine agar 2216"]
CultureMech_003004 --> ing0_Marine_agar_2216
CHEBI_2509["CHEBI:2509"]
ing0_Marine_agar_2216 -.-> CHEBI_2509
ing1_R2A_agar["R2A agar"]
CultureMech_003004 --> ing1_R2A_agar
ing2_NaCl["NaCl"]
CultureMech_003004 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_003004 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_003004 --> ing4_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing4_MgCl2_x_6_H2O -.-> CHEBI_86345
ing5_KCl["KCl"]
CultureMech_003004 --> ing5_KCl
CHEBI_32588["CHEBI:32588"]
ing5_KCl -.-> CHEBI_32588
ing6_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_003004 --> ing6_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing6_CaCl2_x_2_H2O -.-> CHEBI_86158
Ingredients (7)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Marine agar 2216 | 55.1 G_PER_L |
CHEBI:2509
agar
|
|
| 2 | R2A agar | 9.1 G_PER_L |
mediadive.compound:1844 (source link unavailable)
R2A agar
|
|
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
24 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
7 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
5.3 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 6 |
KCl
Cl.K 74.551 g/mol
|
0.7 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 7 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.1 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Preparation
- Adjust pH to 7.5.
- Comment: For preparation of the liquid medium, use Marine broth 2216 (BD-Difco) instead of Marine agar 2216 and R2A broth instead of R2A agar by omitting agar from the R2A agar medium composition (see Medium No. 346).
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- pelagicoccus_agar (CultureMech:003004)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-26T17:53:17.210089Z | mediadive-import | Imported from MediaDive | Source: JCM, ID: J659 |
| 2026-03-13T06:19:17.090753Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003004 |
| 2026-03-17T06:30:39.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:30.737568+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "PELAGICOCCUS AGAR" to "pelagicoccus_agar" for consistent matching |
| 2026-06-05T07:41:41.126706+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:52.441680+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 922e0a8ad4654b60db6fdcbcbd814b3a3dfbe632a104159ca8409922d11fe031 |