ruminococcus_albus_medium

CultureMech:003020 bacterial COMPLEX LIQUID
Original name: RUMINOCOCCUS ALBUS MEDIUM

Overview

External ontology
mediadive.medium:J675 (source link unavailable) — RUMINOCOCCUS ALBUS MEDIUM
Applications
  • Microbial cultivation
pH
7.0
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=675 Commercial Product: LB Medium (Luria-Bertani, Miller formulation) Supplier: Multiple suppliers (Difco, Sigma, etc.) Catalog: Multiple (L3522 Sigma, 244520 BD) Source: https://www.laboratorynotes.com/preparation-of-luria-bertani-lb-miller-broth/ Accessed: 2026-03-28 Constituent composition researched from product specification.

Composition

flowchart LR
    CultureMech_003020["ruminococcus_albus_medium"]
    ing0_Tryptone["Tryptone"]
    CultureMech_003020 --> ing0_Tryptone
    ing1_Yeast_extract["Yeast extract"]
    CultureMech_003020 --> ing1_Yeast_extract
    ing2_Glucose["Glucose"]
    CultureMech_003020 --> ing2_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing2_Glucose -.-> CHEBI_17234
    ing3_Cellobiose["Cellobiose"]
    CultureMech_003020 --> ing3_Cellobiose
    CHEBI_17057["CHEBI:17057"]
    ing3_Cellobiose -.-> CHEBI_17057
    ing4_Resazurin["Resazurin"]
    CultureMech_003020 --> ing4_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing4_Resazurin -.-> CHEBI_8806
    ing5_K2HPO4["K2HPO4"]
    CultureMech_003020 --> ing5_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing5_K2HPO4 -.-> CHEBI_131527
    ing6_KH2PO4["KH2PO4"]
    CultureMech_003020 --> ing6_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing6_KH2PO4 -.-> CHEBI_63036
    ing7__NH4_2SO4["(NH4)2SO4"]
    CultureMech_003020 --> ing7__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing7__NH4_2SO4 -.-> CHEBI_62946
    ing8_NaCl["NaCl"]
    CultureMech_003020 --> ing8_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing8_NaCl -.-> CHEBI_26710
    ing9_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_003020 --> ing9_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing9_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing10_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_003020 --> ing10_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing10_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing11_Isobutyric_acid["Isobutyric acid"]
    CultureMech_003020 --> ing11_Isobutyric_acid
    CHEBI_16135["CHEBI:16135"]
    ing11_Isobutyric_acid -.-> CHEBI_16135
    ing12_Isovaleric_acid["Isovaleric acid"]
    CultureMech_003020 --> ing12_Isovaleric_acid
    CHEBI_28484["CHEBI:28484"]
    ing12_Isovaleric_acid -.-> CHEBI_28484
    ing13_Tryptone["Tryptone"]
    CultureMech_003020 --> ing13_Tryptone
    ing14_Yeast_extract["Yeast extract"]
    CultureMech_003020 --> ing14_Yeast_extract
    ing15_Sodium_chloride["Sodium chloride"]
    CultureMech_003020 --> ing15_Sodium_chloride
    ing15_Sodium_chloride -.-> CHEBI_26710

Ingredients (16)

# Ingredient Concentration Ontology Notes
1 Tryptone 5 G_PER_L
2 Yeast extract 2 G_PER_L
3 Glucose
C6H12O6 180.156 g/mol
3 G_PER_L CHEBI:17234
glucose
4 Cellobiose
C12H22O11 342.297 g/mol
2 G_PER_L CHEBI:17057
cellobiose
5 Resazurin
C12H7NO4 229.191 g/mol
0.001 G_PER_L CHEBI:8806
Resazurin
6 K2HPO4
HO4P.2K 174.174 g/mol
6 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
7 KH2PO4
H2O4P.K 136.084 g/mol
6 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
8 (NH4)2SO4
2H4N.O4S 132.141 g/mol
20 G_PER_L CHEBI:62946
ammonium sulfate
9 NaCl
Cl.Na 58.443 g/mol
12 G_PER_L CHEBI:26710
sodium chloride
10 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
2.5 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
11 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
1.6 G_PER_L CHEBI:86158
calcium chloride dihydrate
12 Isobutyric acid
C4H8O2 88.106 g/mol
10 G_PER_L CHEBI:16135
isobutyric acid
13 Isovaleric acid
C5H10O2 102.133 g/mol
10 G_PER_L CHEBI:28484
isovaleric acid
14 Tryptone
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
10.0 G_PER_L MICRO:0000182 (source link unavailable)
tryptone
Pancreatic digest of casein providing amino acids, peptides, and nitrogen; Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product
15 Yeast extract
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
5.0 G_PER_L FOODON:03315426
yeast extract
Autodigest of Saccharomyces cerevisiae providing vitamins, amino acids, and trace elements; Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product
16 Sodium chloride
Cl.Na 58.443 g/mol
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
10.0 G_PER_L CHEBI:26710
sodium chloride
Maintains osmotic equilibrium (Miller formulation); Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product

Preparation

  1. Boil and cool under CO2. Under a gentle stream of CO2, add 4.0 g Na2CO3, 1.0 ml fatty acid mixture (see below) and 500 mg L-cysteine x HCl x H2O.
  2. Adjust pH to 7.0, distribute into appropriate vessels under N2 and autoclave.

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-26T17:53:17.259008Z mediadive-import Imported from MediaDive Source: JCM, ID: J675
2026-03-13T06:19:17.217953Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:003020
2026-03-17T06:29:44.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:30.876364+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "RUMINOCOCCUS ALBUS MEDIUM" to "ruminococcus_albus_medium" for consistent matching
2026-06-05T07:40:17.572352+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:43.063916+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:37.080773+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint 5d428a24c371b1f38541a6b914d45117f76ebae1624846327dd51ba8ee2e0361