Overview
- External ontology
- komodo.medium:1181 (source link unavailable) — METHYLOCELLA SILVERSTRIS MEDIUM
- Applications
-
- Microbial cultivation
- pH
- 5.8
- Notes
- Source: KOMODO ModelSEED | ID: 1181 | DSMZ Medium: 1181 (mediadive.medium:1181) | Aerobic: No
Composition
flowchart LR
CultureMech_003901["methylocella_silverstris_medium"]
ing0_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_003901 --> ing0_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing0_MgSO4_x_7_H2O -.-> CHEBI_31795
ing1_CaCl2_x_6_H2O["CaCl2 x 6 H2O"]
CultureMech_003901 --> ing1_CaCl2_x_6_H2O
CHEBI_91243["CHEBI:91243"]
ing1_CaCl2_x_6_H2O -.-> CHEBI_91243
ing2_Fe_III_NH4_EDTA["Fe(III)NH4-EDTA"]
CultureMech_003901 --> ing2_Fe_III_NH4_EDTA
ing3_NaNO3["NaNO3"]
CultureMech_003901 --> ing3_NaNO3
CHEBI_63005["CHEBI:63005"]
ing3_NaNO3 -.-> CHEBI_63005
ing4_KH2PO4["KH2PO4"]
CultureMech_003901 --> ing4_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing4_KH2PO4 -.-> CHEBI_63036
ing5_Na2HPO4_x_12_H2O["Na2HPO4 x 12 H2O"]
CultureMech_003901 --> ing5_Na2HPO4_x_12_H2O
CHEBI_34683["CHEBI:34683"]
ing5_Na2HPO4_x_12_H2O -.-> CHEBI_34683
ing6_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_003901 --> ing6_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing6_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing7_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_003901 --> ing7_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing7_MnCl2_x_4_H2O -.-> CHEBI_86368
ing8_H3BO3["H3BO3"]
CultureMech_003901 --> ing8_H3BO3
CHEBI_33118["CHEBI:33118"]
ing8_H3BO3 -.-> CHEBI_33118
ing9_CuCl2_x_6_H2O["CuCl2 x 6 H2O"]
CultureMech_003901 --> ing9_CuCl2_x_6_H2O
CHEBI_49553["CHEBI:49553"]
ing9_CuCl2_x_6_H2O -.-> CHEBI_49553
ing10_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_003901 --> ing10_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing10_CaCl2_x_2_H2O -.-> CHEBI_86158
ing11_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_003901 --> ing11_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing11_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing12_NaH2PO4_x_2_H2O["NaH2PO4 x 2 H2O"]
CultureMech_003901 --> ing12_NaH2PO4_x_2_H2O
CHEBI_37585["CHEBI:37585"]
ing12_NaH2PO4_x_2_H2O -.-> CHEBI_37585
Ingredients (13)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 2 |
CaCl2 x 6 H2O
Ca.2Cl.6H2O 219.074 g/mol
|
0.006 G_PER_L |
CHEBI:91243
calcium chloride hexahydrate
|
|
| 3 | Fe(III)NH4-EDTA | 0.004 G_PER_L | ||
| 4 |
NaNO3
NO3.Na 84.994 g/mol
|
0.2 G_PER_L |
CHEBI:63005
sodium nitrate
|
|
| 5 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.272 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 6 |
Na2HPO4 x 12 H2O
HO4P.2Na 141.958 g/mol
|
6.447 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
[Merged 2 duplicates: 0.717, 5.73] |
| 7 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.01 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 8 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.003 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 9 |
H3BO3
H3BO3 61.833 g/mol
|
0.03 G_PER_L |
CHEBI:33118
boric acid
|
|
| 10 |
CuCl2 x 6 H2O
Cl2Cu 134.452 g/mol
|
0.001 G_PER_L |
CHEBI:49553
copper(II) chloride
|
|
| 11 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.02 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 12 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.003 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 13 |
NaH2PO4 x 2 H2O
H2O4P.Na 119.976 g/mol
|
28.71 G_PER_L |
CHEBI:37585
sodium dihydrogenphosphate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_1181_METHYLOCELLA_SILVERSTRIS_MEDIUM (CultureMech:003901)
- methylocella_silverstris_medium (CultureMech:000623)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1181 |
| 2026-02-03T11:19:06.042362 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1181 |
| 2026-03-13T03:09:08.509011Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:19:23.105380Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003901 |
| 2026-03-17T06:30:14.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:37.602515+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "METHYLOCELLA SILVERSTRIS MEDIUM" to "methylocella_silverstris_medium" for consistent matching |
| 2026-06-05T07:40:19.611428+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:43.700076+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:41.004359+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_1181_METHYLOCELLA_SILVERSTRIS_MEDIUM, methylocella_silverstris_medium |
| 2026-08-06T03:04:41.004416+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint cd93fb384c9456fe596f7d1afd7afbc61338da80ace01ec00f5abd76831ddee7 |