Overview
- External ontology
- komodo.medium:12 (source link unavailable) — SOIL EXTRACT medium
- Applications
-
- Microbial cultivation
- pH range
- {'min': 6.8, 'max': 7.0}
- Notes
- Source: KOMODO ModelSEED | ID: 12 | DSMZ Medium: 12 (mediadive.medium:12) | Aerobic: No
Composition
flowchart LR
CultureMech_004048["soil_extract_medium"]
ing0_air_dried_garden_soil["air-dried garden soil"]
CultureMech_004048 --> ing0_air_dried_garden_soil
ing1_Tap_water["Tap water"]
CultureMech_004048 --> ing1_Tap_water
CHEBI_15377["CHEBI:15377"]
ing1_Tap_water -.-> CHEBI_15377
ing2_Agar["Agar"]
CultureMech_004048 --> ing2_Agar
CHEBI_2509["CHEBI:2509"]
ing2_Agar -.-> CHEBI_2509
Ingredients (3)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | air-dried garden soil | 400 G_PER_L | ||
| 2 |
Tap water
H2O 18.015 g/mol
|
1000 G_PER_L |
CHEBI:15377
water
|
|
| 3 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_12_SOIL_EXTRACT_medium (CultureMech:004048)
- soil_extract_medium (CultureMech:000762)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 12 |
| 2026-02-03T11:19:16.123840 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 12 |
| 2026-03-13T06:19:24.441282Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004048 |
| 2026-03-17T06:30:45.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:39.182028+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "SOIL EXTRACT medium" to "soil_extract_medium" for consistent matching |
| 2026-05-20T06:00:49.995914+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '6.8-7.0' -> {'min': 6.8, 'max': 7.0} |
| 2026-06-05T07:40:20.706898+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:04:42.945913+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_12_SOIL_EXTRACT_medium, soil_extract_medium |
| 2026-08-06T03:04:42.945950+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint f0b7050edfa4bb9fb94b01ee5d1bb8a367c177f1cb7709f1514302b28f1209ec |