Overview
- External ontology
- komodo.medium:155 (source link unavailable) — BEGGIATOA medium
- Applications
-
- Microbial cultivation
- pH
- 7.4
- Notes
- Source: KOMODO ModelSEED | ID: 155 | DSMZ Medium: 155 (mediadive.medium:155) | Aerobic: No
Composition
flowchart LR
CultureMech_004177["beggiatoa_medium"]
ing0_CaSO4["CaSO4"]
CultureMech_004177 --> ing0_CaSO4
CHEBI_31346["CHEBI:31346"]
ing0_CaSO4 -.-> CHEBI_31346
ing1_NH4Cl["NH4Cl"]
CultureMech_004177 --> ing1_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing1_NH4Cl -.-> CHEBI_31206
ing2_K2HPO4["K2HPO4"]
CultureMech_004177 --> ing2_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing2_K2HPO4 -.-> CHEBI_131527
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_004177 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_Na_acetate["Na-acetate"]
CultureMech_004177 --> ing4_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing4_Na_acetate -.-> CHEBI_32954
ing5_Nutrient_broth["Nutrient broth"]
CultureMech_004177 --> ing5_Nutrient_broth
ing6_Agar["Agar"]
CultureMech_004177 --> ing6_Agar
CHEBI_2509["CHEBI:2509"]
ing6_Agar -.-> CHEBI_2509
ing7_Catalase["Catalase"]
CultureMech_004177 --> ing7_Catalase
ing8_EDTA["EDTA"]
CultureMech_004177 --> ing8_EDTA
CHEBI_4735["CHEBI:4735"]
ing8_EDTA -.-> CHEBI_4735
ing9_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_004177 --> ing9_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing9_FeSO4_x_7_H2O -.-> CHEBI_75836
ing10_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_004177 --> ing10_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing10_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing11_MnSO4_x_4_H2O["MnSO4 x 4 H2O"]
CultureMech_004177 --> ing11_MnSO4_x_4_H2O
CHEBI_86358["CHEBI:86358"]
ing11_MnSO4_x_4_H2O -.-> CHEBI_86358
ing12_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
CultureMech_004177 --> ing12_CuSO4_x_5_H2O
CHEBI_31440["CHEBI:31440"]
ing12_CuSO4_x_5_H2O -.-> CHEBI_31440
ing13_H3BO3["H3BO3"]
CultureMech_004177 --> ing13_H3BO3
CHEBI_33118["CHEBI:33118"]
ing13_H3BO3 -.-> CHEBI_33118
ing14_Co_NO3_2["Co(NO3)2"]
CultureMech_004177 --> ing14_Co_NO3_2
CHEBI_86209["CHEBI:86209"]
ing14_Co_NO3_2 -.-> CHEBI_86209
ing15_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_004177 --> ing15_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing15_Na2MoO4_x_2_H2O -.-> CHEBI_75213
Ingredients (16)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
CaSO4
Ca.O4S 136.141 g/mol
|
20 G_PER_L |
CHEBI:31346
calcium sulfate
|
|
| 2 |
NH4Cl
Cl.H4N 53.492 g/mol
|
0.00045 G_PER_L |
CHEBI:31206
ammonium chloride
|
|
| 3 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.0001 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.0002 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
0.5 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 6 | Nutrient broth | 0.5 G_PER_L | ||
| 7 | Agar | 10 G_PER_L |
CHEBI:2509
agar
|
(if necessary) |
| 8 | Catalase | 35000 G_PER_L | ||
| 9 |
EDTA
C10H16N2O8 292.244 g/mol
|
0.2 G_PER_L |
CHEBI:4735
ethylenediaminetetraacetic acid
|
|
| 10 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
0.7 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 11 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.01 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 12 |
MnSO4 x 4 H2O
4H2O.Mn.O4S 223.061 g/mol
|
0.002 G_PER_L |
CHEBI:86358
manganese(II) sulfate tetrahydrate
|
|
| 13 |
CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
|
5e-06 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
|
| 14 |
H3BO3
H3BO3 61.833 g/mol
|
0.01 G_PER_L |
CHEBI:33118
boric acid
|
|
| 15 |
Co(NO3)2
Co.2NO3 182.941 g/mol
|
0.001 G_PER_L |
CHEBI:86209
cobalt dinitrate
|
|
| 16 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.001 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_155_BEGGIATOA_medium (CultureMech:004177)
- beggiatoa_medium (CultureMech:001036)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-06-14T05:58:58.561437+00:00 | idnf-grounding-fix-v1.0 | Fixed ID_NOT_FOUND term groundings | Absent/obsolete CHEBI term ids fixed - 0 re-grounded to the correct CHEBI, 1 de-grounded (mixture or unverifiable). |
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 155 |
| 2026-02-03T11:19:01.819672 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 155 |
| 2026-03-13T06:19:25.659362Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004177 |
| 2026-03-17T06:30:00.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:40.598495+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "BEGGIATOA medium" to "beggiatoa_medium" for consistent matching |
| 2026-06-05T07:40:21.287084+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 14 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.264867+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:43.825585+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_155_BEGGIATOA_medium, beggiatoa_medium |
| 2026-08-06T03:04:43.825620+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 46875cbc6812cf0da16eded1674d637e24bbc87a459e4148add22170a5b4d524 |