beggiatoa_medium

CultureMech:004177 bacterial COMPLEX SOLID_AGAR
Original name: BEGGIATOA medium

Overview

External ontology
komodo.medium:155 (source link unavailable) — BEGGIATOA medium
Applications
  • Microbial cultivation
pH
7.4
Notes
Source: KOMODO ModelSEED | ID: 155 | DSMZ Medium: 155 (mediadive.medium:155) | Aerobic: No

Composition

flowchart LR
    CultureMech_004177["beggiatoa_medium"]
    ing0_CaSO4["CaSO4"]
    CultureMech_004177 --> ing0_CaSO4
    CHEBI_31346["CHEBI:31346"]
    ing0_CaSO4 -.-> CHEBI_31346
    ing1_NH4Cl["NH4Cl"]
    CultureMech_004177 --> ing1_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing1_NH4Cl -.-> CHEBI_31206
    ing2_K2HPO4["K2HPO4"]
    CultureMech_004177 --> ing2_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing2_K2HPO4 -.-> CHEBI_131527
    ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_004177 --> ing3_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing4_Na_acetate["Na-acetate"]
    CultureMech_004177 --> ing4_Na_acetate
    CHEBI_32954["CHEBI:32954"]
    ing4_Na_acetate -.-> CHEBI_32954
    ing5_Nutrient_broth["Nutrient broth"]
    CultureMech_004177 --> ing5_Nutrient_broth
    ing6_Agar["Agar"]
    CultureMech_004177 --> ing6_Agar
    CHEBI_2509["CHEBI:2509"]
    ing6_Agar -.-> CHEBI_2509
    ing7_Catalase["Catalase"]
    CultureMech_004177 --> ing7_Catalase
    ing8_EDTA["EDTA"]
    CultureMech_004177 --> ing8_EDTA
    CHEBI_4735["CHEBI:4735"]
    ing8_EDTA -.-> CHEBI_4735
    ing9_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_004177 --> ing9_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing9_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing10_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_004177 --> ing10_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing10_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing11_MnSO4_x_4_H2O["MnSO4 x 4 H2O"]
    CultureMech_004177 --> ing11_MnSO4_x_4_H2O
    CHEBI_86358["CHEBI:86358"]
    ing11_MnSO4_x_4_H2O -.-> CHEBI_86358
    ing12_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_004177 --> ing12_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing12_CuSO4_x_5_H2O -.-> CHEBI_31440
    ing13_H3BO3["H3BO3"]
    CultureMech_004177 --> ing13_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing13_H3BO3 -.-> CHEBI_33118
    ing14_Co_NO3_2["Co(NO3)2"]
    CultureMech_004177 --> ing14_Co_NO3_2
    CHEBI_86209["CHEBI:86209"]
    ing14_Co_NO3_2 -.-> CHEBI_86209
    ing15_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_004177 --> ing15_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing15_Na2MoO4_x_2_H2O -.-> CHEBI_75213

Ingredients (16)

# Ingredient Concentration Ontology Notes
1 CaSO4
Ca.O4S 136.141 g/mol
20 G_PER_L CHEBI:31346
calcium sulfate
2 NH4Cl
Cl.H4N 53.492 g/mol
0.00045 G_PER_L CHEBI:31206
ammonium chloride
3 K2HPO4
HO4P.2K 174.174 g/mol
0.0001 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
4 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.0002 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
5 Na-acetate
C2H3O2.Na 82.034 g/mol
0.5 G_PER_L CHEBI:32954
sodium acetate
6 Nutrient broth 0.5 G_PER_L
7 Agar 10 G_PER_L CHEBI:2509
agar
 (if necessary)
8 Catalase 35000 G_PER_L
9 EDTA
C10H16N2O8 292.244 g/mol
0.2 G_PER_L CHEBI:4735
ethylenediaminetetraacetic acid
10 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
0.7 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
11 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
0.01 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
12 MnSO4 x 4 H2O
4H2O.Mn.O4S 223.061 g/mol
0.002 G_PER_L CHEBI:86358
manganese(II) sulfate tetrahydrate
13 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
5e-06 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
14 H3BO3
H3BO3 61.833 g/mol
0.01 G_PER_L CHEBI:33118
boric acid
15 Co(NO3)2
Co.2NO3 182.941 g/mol
0.001 G_PER_L CHEBI:86209
cobalt dinitrate
16 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.001 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-06-14T05:58:58.561437+00:00 idnf-grounding-fix-v1.0 Fixed ID_NOT_FOUND term groundings Absent/obsolete CHEBI term ids fixed - 0 re-grounded to the correct CHEBI, 1 de-grounded (mixture or unverifiable).
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 155
2026-02-03T11:19:01.819672 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 155
2026-03-13T06:19:25.659362Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:004177
2026-03-17T06:30:00.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:40.598495+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "BEGGIATOA medium" to "beggiatoa_medium" for consistent matching
2026-06-05T07:40:21.287084+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 14 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.264867+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.