Overview
- External ontology
- komodo.medium:262 (source link unavailable) — J - AGAR
- Applications
-
- Microbial cultivation
- pH range
- {'min': 7.3, 'max': 7.5}
- Notes
- Source: KOMODO ModelSEED | ID: 262 | DSMZ Medium: 262 (mediadive.medium:262) | Aerobic: No
Composition
flowchart LR
CultureMech_004666["j_agar"]
ing0_Tryptone["Tryptone"]
CultureMech_004666 --> ing0_Tryptone
ing1_Yeast_extract["Yeast extract"]
CultureMech_004666 --> ing1_Yeast_extract
ing2_Glucose["Glucose"]
CultureMech_004666 --> ing2_Glucose
CHEBI_17234["CHEBI:17234"]
ing2_Glucose -.-> CHEBI_17234
ing3_K2HPO4["K2HPO4"]
CultureMech_004666 --> ing3_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing3_K2HPO4 -.-> CHEBI_131527
ing4_Agar["Agar"]
CultureMech_004666 --> ing4_Agar
CHEBI_2509["CHEBI:2509"]
ing4_Agar -.-> CHEBI_2509
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Tryptone | 5 G_PER_L | ||
| 2 | Yeast extract | 15 G_PER_L | ||
| 3 |
Glucose
C6H12O6 180.156 g/mol
|
2 G_PER_L |
CHEBI:17234
glucose
|
|
| 4 |
K2HPO4
HO4P.2K 174.174 g/mol
|
3 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 5 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_262_J_-_AGAR (CultureMech:004666)
- j_agar (CultureMech:001361)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 262 |
| 2026-02-03T11:19:10.251630 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 262 |
| 2026-03-13T06:19:27.958971Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004666 |
| 2026-03-17T06:30:27.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:43.270037+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "J - AGAR" to "j_agar" for consistent matching |
| 2026-05-20T06:00:50.898118+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '7.3-7.5' -> {'min': 7.3, 'max': 7.5} |
| 2026-06-05T07:40:21.960789+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.471194+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:46.323874+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_262_J_-_AGAR, j_agar |
| 2026-08-06T03:04:46.323914+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint b45d07a34db1705ef8da9a227b10ce855da5aa989637dceb538f78094287da7d |