rhodospirillaceae_medium_modified

CultureMech:004707 bacterial COMPLEX LIQUID
Original name: RHODOSPIRILLACEAE medium (modified)

Overview

External ontology
komodo.medium:27 (source link unavailable) — RHODOSPIRILLACEAE medium (modified)
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'acid_rhodospirillaceae_medium', 'source': 'KOMODO', 'source_id': 'komodo.medium:26', 'original_category': 'bacterial'}
  • {'name': 'acid_rhodospirillaceae_medium', 'source': 'MediaDive', 'source_id': 'mediadive.medium:26', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_10138', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_10138', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_10139', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_10139', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_13233', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_13233', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_13235', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_13235', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_1374', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_1374', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_17143', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_17143', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_18633', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_18633', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_18937', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_18937', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_19785', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_19785', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_19945', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_19945', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_19946', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_19946', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_2132', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_2132', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_2351', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_2351', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_2698', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_2698', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_2780', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_2780', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_4180', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_4180', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_5909', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_5909', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_9894', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_9894', 'original_category': 'bacterial'}
  • {'name': 'medium_27_modified_for_dsm_9987', 'source': 'KOMODO', 'source_id': 'komodo.medium:27_9987', 'original_category': 'bacterial'}
pH
6.8
Notes
Source: KOMODO ModelSEED | ID: 27 | DSMZ Medium: 27 (mediadive.medium:27) | Aerobic: Yes

Composition

flowchart LR
    CultureMech_004707["rhodospirillaceae_medium_modified"]
    ing0_Yeast_extract["Yeast extract"]
    CultureMech_004707 --> ing0_Yeast_extract
    ing1_Disodium_succinate["Disodium succinate"]
    CultureMech_004707 --> ing1_Disodium_succinate
    CHEBI_63675["CHEBI:63675"]
    ing1_Disodium_succinate -.-> CHEBI_63675
    ing2_Ammonium_acetate["Ammonium acetate"]
    CultureMech_004707 --> ing2_Ammonium_acetate
    CHEBI_62947["CHEBI:62947"]
    ing2_Ammonium_acetate -.-> CHEBI_62947
    ing3_Fe_III__citrate["Fe(III) citrate"]
    CultureMech_004707 --> ing3_Fe_III__citrate
    CHEBI_144421["CHEBI:144421"]
    ing3_Fe_III__citrate -.-> CHEBI_144421
    ing4_KH2PO4["KH2PO4"]
    CultureMech_004707 --> ing4_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing4_KH2PO4 -.-> CHEBI_63036
    ing5_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_004707 --> ing5_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing5_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing6_NaCl["NaCl"]
    CultureMech_004707 --> ing6_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing6_NaCl -.-> CHEBI_26710
    ing7_NH4Cl["NH4Cl"]
    CultureMech_004707 --> ing7_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing7_NH4Cl -.-> CHEBI_31206
    ing8_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_004707 --> ing8_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing8_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing9_Vitamin_B12["Vitamin B12"]
    CultureMech_004707 --> ing9_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing9_Vitamin_B12 -.-> CHEBI_176843
    ing10_L_Cysteine_HCl["L-Cysteine HCl"]
    CultureMech_004707 --> ing10_L_Cysteine_HCl
    CHEBI_91247["CHEBI:91247"]
    ing10_L_Cysteine_HCl -.-> CHEBI_91247
    ing11_Resazurin["Resazurin"]
    CultureMech_004707 --> ing11_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing11_Resazurin -.-> CHEBI_8806
    ing12_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_004707 --> ing12_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing12_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing13_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_004707 --> ing13_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing13_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing14_H3BO3["H3BO3"]
    CultureMech_004707 --> ing14_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing14_H3BO3 -.-> CHEBI_33118
    ing15_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_004707 --> ing15_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing15_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing16_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
    CultureMech_004707 --> ing16_CuCl2_x_2_H2O
    CHEBI_86318["CHEBI:86318"]
    ing16_CuCl2_x_2_H2O -.-> CHEBI_86318
    ing17_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_004707 --> ing17_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing17_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing18_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_004707 --> ing18_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing18_Na2MoO4_x_2_H2O -.-> CHEBI_75213

Ingredients (19)

# Ingredient Concentration Ontology Notes
1 Yeast extract 0.2 G_PER_L
2 Disodium succinate
C4H4O4.2Na 162.052 g/mol
1 G_PER_L CHEBI:63675
sodium succinate (anhydrous)
3 Ammonium acetate
C2H3O2.H4N 77.083 g/mol
0.5 G_PER_L CHEBI:62947
ammonium acetate
4 Fe(III) citrate
C6H5FeO7 244.944 g/mol
0.005 G_PER_L CHEBI:144421
iron(III) citrate
5 KH2PO4
H2O4P.K 136.084 g/mol
0.5 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
6 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.4 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
7 NaCl
Cl.Na 58.443 g/mol
0.4 G_PER_L CHEBI:26710
sodium chloride
8 NH4Cl
Cl.H4N 53.492 g/mol
0.4 G_PER_L CHEBI:31206
ammonium chloride
9 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.05 G_PER_L CHEBI:86158
calcium chloride dihydrate
10 Vitamin B12 0.4 G_PER_L CHEBI:176843
vitamin B12
11 L-Cysteine HCl
C3H7NO2S.HCl 157.622 g/mol
0.3 G_PER_L CHEBI:91247
L-cysteine hydrochloride
12 Resazurin
C12H7NO4 229.191 g/mol
0.005 G_PER_L CHEBI:8806
Resazurin
13 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
0.1 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
14 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.03 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
15 H3BO3
H3BO3 61.833 g/mol
0.3 G_PER_L CHEBI:33118
boric acid
16 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.2 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
17 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.01 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
18 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.02 G_PER_L CHEBI:34887
nickel dichloride
19 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.03 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

Merged from 23 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 27
2026-02-03T11:19:12.574251 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 27
2026-03-13T06:19:28.231019Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:004707
2026-03-17T06:30:35.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:43.595106+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "RHODOSPIRILLACEAE medium (modified)" to "rhodospirillaceae_medium_modified" for consistent matching
2026-06-05T07:40:22.037126+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 17 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.495000+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:46.535214+00:00 recipe-merger Merged 23 duplicate recipes into canonical record Sources: KOMODO_26_ACID_RHODOSPIRILLACEAE_medium, KOMODO_27_RHODOSPIRILLACEAE_medium_modified, acid_rhodospirillaceae_medium, medium_27_modified_for_dsm_10138, medium_27_modified_for_dsm_10139, medium_27_modified_for_dsm_13233, medium_27_modified_for_dsm_13235, medium_27_modified_for_dsm_1374, medium_27_modified_for_dsm_17143, medium_27_modified_for_dsm_18633, medium_27_modified_for_dsm_18937, medium_27_modified_for_dsm_19785, medium_27_modified_for_dsm_19945, medium_27_modified_for_dsm_19946, medium_27_modified_for_dsm_2132, medium_27_modified_for_dsm_2351, medium_27_modified_for_dsm_2698, medium_27_modified_for_dsm_2780, medium_27_modified_for_dsm_4180, medium_27_modified_for_dsm_5909, medium_27_modified_for_dsm_9894, medium_27_modified_for_dsm_9987, rhodospirillaceae_medium_modified
2026-08-06T03:04:46.535391+00:00 merge_recipes.py MERGED_RECIPES merged 23 source recipe(s) on fingerprint 03e1f0e4e727950f85102146edd2b23065ea9d3e949694c164efd0cd1b3a23bd