Overview
- External ontology
- komodo.medium:365 (source link unavailable) — PSEUDOMONAS INDIGOFERA medium
- Applications
-
- Microbial cultivation
- pH range
- {'min': 7.0, 'max': 7.2}
- Notes
- Source: KOMODO ModelSEED | ID: 365 | DSMZ Medium: 365 (mediadive.medium:365) | Aerobic: No
Composition
flowchart LR
CultureMech_005088["pseudomonas_indigofera_medium"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_005088 --> ing0_Yeast_extract
ing1_Glucose["Glucose"]
CultureMech_005088 --> ing1_Glucose
CHEBI_17234["CHEBI:17234"]
ing1_Glucose -.-> CHEBI_17234
ing2_Na_acetate["Na-acetate"]
CultureMech_005088 --> ing2_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing2_Na_acetate -.-> CHEBI_32954
ing3_Agar["Agar"]
CultureMech_005088 --> ing3_Agar
CHEBI_2509["CHEBI:2509"]
ing3_Agar -.-> CHEBI_2509
Ingredients (4)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 10 G_PER_L | ||
| 2 |
Glucose
C6H12O6 180.156 g/mol
|
5 G_PER_L |
CHEBI:17234
glucose
|
|
| 3 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
0.5 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 4 | Agar | 12 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_365_PSEUDOMONAS_INDIGOFERA_medium (CultureMech:005088)
- pseudomonas_indigofera_medium (CultureMech:001466)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 365 |
| 2026-02-03T11:19:05.845601 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 365 |
| 2026-03-13T06:19:30.026541Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005088 |
| 2026-03-17T06:30:14.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:45.699102+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "PSEUDOMONAS INDIGOFERA medium" to "pseudomonas_indigofera_medium" for consistent matching |
| 2026-05-20T06:00:51.411849+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '7.0-7.2' -> {'min': 7.0, 'max': 7.2} |
| 2026-06-05T07:40:22.744406+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.691969+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:47.951658+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_365_PSEUDOMONAS_INDIGOFERA_medium, pseudomonas_indigofera_medium |
| 2026-08-06T03:04:47.951689+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 62d73333a00ad77852332393fa7c390270abb653958df43cc13ee751cbfb734a |