Overview
- External ontology
- komodo.medium:3 (source link unavailable) — AZOTOBACTER MEDIUM
- Applications
-
- Microbial cultivation
- Synonyms
-
- {'name': 'medium_3_modified_for_dsm_44106', 'source': 'KOMODO', 'source_id': 'komodo.medium:3_44106', 'original_category': 'bacterial'}
- pH
- 7.3
- Notes
- Source: KOMODO ModelSEED | ID: 3 | DSMZ Medium: 3 (mediadive.medium:3) | Aerobic: No
Composition
flowchart LR
CultureMech_005190["azotobacter_medium"]
ing0_Glucose["Glucose"]
CultureMech_005190 --> ing0_Glucose
CHEBI_17234["CHEBI:17234"]
ing0_Glucose -.-> CHEBI_17234
ing1_Mannitol["Mannitol"]
CultureMech_005190 --> ing1_Mannitol
CHEBI_29864["CHEBI:29864"]
ing1_Mannitol -.-> CHEBI_29864
ing2_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_005190 --> ing2_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing2_CaCl2_x_2_H2O -.-> CHEBI_86158
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_005190 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_005190 --> ing4_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing4_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing5_K2HPO4["K2HPO4"]
CultureMech_005190 --> ing5_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing5_K2HPO4 -.-> CHEBI_131527
ing6_KH2PO4["KH2PO4"]
CultureMech_005190 --> ing6_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing6_KH2PO4 -.-> CHEBI_63036
ing7_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_005190 --> ing7_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing7_FeSO4_x_7_H2O -.-> CHEBI_75836
ing8_CaCO3["CaCO3"]
CultureMech_005190 --> ing8_CaCO3
CHEBI_3311["CHEBI:3311"]
ing8_CaCO3 -.-> CHEBI_3311
ing9_Agar["Agar"]
CultureMech_005190 --> ing9_Agar
CHEBI_2509["CHEBI:2509"]
ing9_Agar -.-> CHEBI_2509
Ingredients (10)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Glucose
C6H12O6 180.156 g/mol
|
5 G_PER_L |
CHEBI:17234
glucose
|
|
| 2 |
Mannitol
C6H14O6 182.172 g/mol
|
5 G_PER_L |
CHEBI:29864
mannitol
|
|
| 3 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.1 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.1 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.005 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 6 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.9 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 7 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.1 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 8 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
0.01 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 9 |
CaCO3
CO3.Ca 100.086 g/mol
|
5 G_PER_L |
CHEBI:3311
calcium carbonate
|
|
| 10 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 3 source records.
- KOMODO_3_AZOTOBACTER_MEDIUM (CultureMech:005190)
- azotobacter_medium (CultureMech:001510)
- medium_3_modified_for_dsm_44106 (CultureMech:004778)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 3 |
| 2026-02-03T11:19:09.704756 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 3 |
| 2026-03-13T06:19:30.962751Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005190 |
| 2026-03-17T06:30:25.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:46.788704+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "AZOTOBACTER MEDIUM" to "azotobacter_medium" for consistent matching |
| 2026-06-05T07:40:23.055029+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 10 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.801909+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:48.585879+00:00 | recipe-merger | Merged 3 duplicate recipes into canonical record | Sources: KOMODO_3_AZOTOBACTER_MEDIUM, azotobacter_medium, medium_3_modified_for_dsm_44106 |
| 2026-08-06T03:04:48.585931+00:00 | merge_recipes.py | MERGED_RECIPES | merged 3 source recipe(s) on fingerprint 3762de72a3f7a77aa967501b92a3f50bf8ca9049914cfd321152490da41b62e3 |