plates_with_fluoranthene

CultureMech:005506 bacterial COMPLEX SOLID_AGAR
Original name: PLATES WITH FLUORANTHENE

Overview

External ontology
komodo.medium:462a (source link unavailable) — PLATES WITH FLUORANTHENE
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'mineral_medium_brunner_with_vitamins', 'source': 'KOMODO', 'source_id': 'komodo.medium:462', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_11192', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_11192', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_13439', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_13439', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_13620', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_13620', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_13957', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_13957', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_14926', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_14926', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_16550', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_16550', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_18203', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_18203', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_18781', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_18781', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_21507', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_21507', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_22840', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_22840', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_22913', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_22913', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_23828', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_23828', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_24952', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_24952', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_6344', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_6344', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_6508', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_6508', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_6537', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_6537', 'original_category': 'bacterial'}
  • {'name': 'medium_462_modified_for_dsm_7356', 'source': 'KOMODO', 'source_id': 'komodo.medium:462_7356', 'original_category': 'bacterial'}
  • {'name': 'medium_462a_modified_for_dsm_11094', 'source': 'KOMODO', 'source_id': 'komodo.medium:462a_11094', 'original_category': 'bacterial'}
  • {'name': 'medium_462a_modified_for_dsm_11095', 'source': 'KOMODO', 'source_id': 'komodo.medium:462a_11095', 'original_category': 'bacterial'}
  • {'name': 'medium_462a_modified_for_dsm_11096', 'source': 'KOMODO', 'source_id': 'komodo.medium:462a_11096', 'original_category': 'bacterial'}
  • {'name': 'medium_462a_modified_for_dsm_12247', 'source': 'KOMODO', 'source_id': 'komodo.medium:462a_12247', 'original_category': 'bacterial'}
pH
6.9
Notes
Source: KOMODO ModelSEED | ID: 462a | DSMZ Medium: 462a (mediadive.medium:462a) | Aerobic: No Commercial Product: Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Supplier: Multiple suppliers (BD, Sigma, Neogen) Catalog: Multiple (22092 Sigma, 211825 BD) Source: https://en.wikipedia.org/wiki/Tryptic_soy_broth Accessed: 2026-03-28 Constituent composition researched from product specification.

Composition

flowchart LR
    CultureMech_005506["plates_with_fluoranthene"]
    ing0_Fluoranthene["Fluoranthene"]
    CultureMech_005506 --> ing0_Fluoranthene
    CHEBI_33083["CHEBI:33083"]
    ing0_Fluoranthene -.-> CHEBI_33083
    ing1_Na2HPO4["Na2HPO4"]
    CultureMech_005506 --> ing1_Na2HPO4
    CHEBI_34683["CHEBI:34683"]
    ing1_Na2HPO4 -.-> CHEBI_34683
    ing2_KH2PO4["KH2PO4"]
    CultureMech_005506 --> ing2_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing2_KH2PO4 -.-> CHEBI_63036
    ing3__NH4_2SO4["(NH4)2SO4"]
    CultureMech_005506 --> ing3__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing3__NH4_2SO4 -.-> CHEBI_62946
    ing4_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_005506 --> ing4_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing4_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing5_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_005506 --> ing5_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing5_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing6_EDTA["EDTA"]
    CultureMech_005506 --> ing6_EDTA
    CHEBI_4735["CHEBI:4735"]
    ing6_EDTA -.-> CHEBI_4735
    ing7_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_005506 --> ing7_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing7_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing8_p_Aminobenzoate["p-Aminobenzoate"]
    CultureMech_005506 --> ing8_p_Aminobenzoate
    CHEBI_17836["CHEBI:17836"]
    ing8_p_Aminobenzoate -.-> CHEBI_17836
    ing9_Biotin["Biotin"]
    CultureMech_005506 --> ing9_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing9_Biotin -.-> CHEBI_15956
    ing10_Nicotinic_acid["Nicotinic acid"]
    CultureMech_005506 --> ing10_Nicotinic_acid
    CHEBI_15940["CHEBI:15940"]
    ing10_Nicotinic_acid -.-> CHEBI_15940
    ing11_Thiamine_HCl_x_2_H2O["Thiamine-HCl x 2 H2O"]
    CultureMech_005506 --> ing11_Thiamine_HCl_x_2_H2O
    CHEBI_132751["CHEBI:132751"]
    ing11_Thiamine_HCl_x_2_H2O -.-> CHEBI_132751
    ing12_Calcium_pantothenate["Calcium pantothenate"]
    CultureMech_005506 --> ing12_Calcium_pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing12_Calcium_pantothenate -.-> CHEBI_31345
    ing13_Pyridoxamine["Pyridoxamine"]
    CultureMech_005506 --> ing13_Pyridoxamine
    CHEBI_16410["CHEBI:16410"]
    ing13_Pyridoxamine -.-> CHEBI_16410
    ing14_Vitamin_B12["Vitamin B12"]
    CultureMech_005506 --> ing14_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing14_Vitamin_B12 -.-> CHEBI_176843
    ing15_Peptone["Peptone"]
    CultureMech_005506 --> ing15_Peptone
    ing16_Meat_extract["Meat extract"]
    CultureMech_005506 --> ing16_Meat_extract
    ing17_Agar["Agar"]
    CultureMech_005506 --> ing17_Agar
    CHEBI_2509["CHEBI:2509"]
    ing17_Agar -.-> CHEBI_2509
    ing18_Casein_peptone["Casein peptone"]
    CultureMech_005506 --> ing18_Casein_peptone
    ing19_Soy_peptone["Soy peptone"]
    CultureMech_005506 --> ing19_Soy_peptone
    ing20_NaCl["NaCl"]
    CultureMech_005506 --> ing20_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing20_NaCl -.-> CHEBI_26710
    ing21_Pancreatic_digest_of_casein["Pancreatic digest of casein"]
    CultureMech_005506 --> ing21_Pancreatic_digest_of_casein
    ing22_Peptic_digest_of_soybean_meal["Peptic digest of soybean meal"]
    CultureMech_005506 --> ing22_Peptic_digest_of_soybean_meal
    ing23_Glucose["Glucose"]
    CultureMech_005506 --> ing23_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing23_Glucose -.-> CHEBI_17234
    ing24_Sodium_chloride["Sodium chloride"]
    CultureMech_005506 --> ing24_Sodium_chloride
    ing24_Sodium_chloride -.-> CHEBI_26710
    ing25_Dipotassium_phosphate["Dipotassium phosphate"]
    CultureMech_005506 --> ing25_Dipotassium_phosphate
    CHEBI_131527["CHEBI:131527"]
    ing25_Dipotassium_phosphate -.-> CHEBI_131527
    ing26_Agar["Agar"]
    CultureMech_005506 --> ing26_Agar
    ing26_Agar -.-> CHEBI_2509
    ing27_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_005506 --> ing27_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing27_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing28_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_005506 --> ing28_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing28_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing29_H3BO3["H3BO3"]
    CultureMech_005506 --> ing29_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing29_H3BO3 -.-> CHEBI_33118
    CultureMech_005506 --> more["...4 more"]

Ingredients (34)

# Ingredient Concentration Ontology Notes
1 Fluoranthene
C16H10 202.256 g/mol
2 G_PER_L CHEBI:33083
fluoranthene
2 Na2HPO4
HO4P.2Na 141.958 g/mol
2.44 G_PER_L CHEBI:34683
disodium hydrogenphosphate
3 KH2PO4
H2O4P.K 136.084 g/mol
1.52 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
4 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.5 G_PER_L CHEBI:62946
ammonium sulfate
5 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.2 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
6 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.05 G_PER_L CHEBI:86158
calcium chloride dihydrate
7 EDTA
C10H16N2O8 292.244 g/mol
0.5 G_PER_L CHEBI:4735
ethylenediaminetetraacetic acid
8 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
0.2 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
9 p-Aminobenzoate
C7H6NO2 136.13 g/mol
0.01 G_PER_L CHEBI:17836
4-aminobenzoate
10 Biotin
C10H16N2O3S 244.316 g/mol
0.002 G_PER_L CHEBI:15956
biotin
11 Nicotinic acid
C6H5NO2 123.111 g/mol
0.02 G_PER_L CHEBI:15940
nicotinic acid
12 Thiamine-HCl x 2 H2O
C12H18N4OS.2Cl.2H2O 373.306 g/mol
0.01 G_PER_L CHEBI:132751
thiamine hydrochloride dihydrate
13 Calcium pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.005 G_PER_L CHEBI:31345
Calcium pantothenate
14 Pyridoxamine
C8H12N2O2 168.196 g/mol
0.05 G_PER_L CHEBI:16410
pyridoxamine
15 Vitamin B12 0.02 G_PER_L CHEBI:176843
vitamin B12
16 Peptone 5 G_PER_L
17 Meat extract 3 G_PER_L
18 Agar 50.0 G_PER_L CHEBI:2509
agar
 (for solid medium) [Merged 3 duplicates: 15.0, 15.0, 20.0]
19 Casein peptone 15 G_PER_L
20 Soy peptone 5 G_PER_L
21 NaCl
Cl.Na 58.443 g/mol
5 G_PER_L CHEBI:26710
sodium chloride
22 Pancreatic digest of casein
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
17.0 G_PER_L MICRO:0000182 (source link unavailable)
tryptone
 Pancreatic enzymatic digest of casein providing amino acids and peptides; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
23 Peptic digest of soybean meal
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
3.0 G_PER_L FOODON:03315720
vegetable protein, hydrolyzed
 Peptic digest of soybean meal providing additional peptides and carbohydrates; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
24 Glucose
C6H12O6 180.156 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
2.5 G_PER_L CHEBI:17234
glucose
 Carbon/energy source; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
25 Sodium chloride
Cl.Na 58.443 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
5.0 G_PER_L CHEBI:26710
sodium chloride
 Maintains osmotic equilibrium; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
26 Dipotassium phosphate
HO4P.2K 174.174 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
2.5 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
 pH buffer; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
27 Agar
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
15.0 G_PER_L CHEBI:2509
agar
 Solidifying agent (for TSA only, not in TSB); Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
28 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
0.1 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
29 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.03 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
30 H3BO3
H3BO3 61.833 g/mol
0.3 G_PER_L CHEBI:33118
boric acid
31 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.2 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
32 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.01 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
33 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.02 G_PER_L CHEBI:34887
nickel dichloride
34 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.03 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

Merged from 24 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 462a
2026-02-03T11:19:07.170011 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 462
2026-03-13T03:09:11.318686Z data-quality-cleanup-v1.0 Data quality fixes Merged 2 duplicate ingredient(s)
2026-03-13T06:19:33.504539Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005506
2026-03-17T06:30:18.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:49.625381+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "PLATES WITH FLUORANTHENE" to "plates_with_fluoranthene" for consistent matching
2026-06-05T07:40:23.582488+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 23 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.975481+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:52.094125+00:00 recipe-merger Merged 24 duplicate recipes into canonical record Sources: KOMODO_462_MINERAL_MEDIUM_BRUNNER_WITH_VITAMINS, KOMODO_462a_PLATES_WITH_FLUORANTHENE, medium_462_modified_for_dsm_11192, medium_462_modified_for_dsm_13439, medium_462_modified_for_dsm_13620, medium_462_modified_for_dsm_13957, medium_462_modified_for_dsm_14926, medium_462_modified_for_dsm_16550, medium_462_modified_for_dsm_18203, medium_462_modified_for_dsm_18781, medium_462_modified_for_dsm_21507, medium_462_modified_for_dsm_22840, medium_462_modified_for_dsm_22913, medium_462_modified_for_dsm_23828, medium_462_modified_for_dsm_24952, medium_462_modified_for_dsm_6344, medium_462_modified_for_dsm_6508, medium_462_modified_for_dsm_6537, medium_462_modified_for_dsm_7356, medium_462a_modified_for_dsm_11094, medium_462a_modified_for_dsm_11095, medium_462a_modified_for_dsm_11096, medium_462a_modified_for_dsm_12247, plates_with_fluoranthene
2026-08-06T03:04:52.094560+00:00 merge_recipes.py MERGED_RECIPES merged 24 source recipe(s) on fingerprint 6d0480c61fb7cf2d0d3a78af5caf81fd606e8942b19092f05948af726ef44655