Overview
- External ontology
- komodo.medium:489 (source link unavailable) — CLOSTRIDIUM AEROTOLERANS medium
- Applications
-
- Microbial cultivation
- Synonyms
-
- {'name': 'lacrimispora_medium', 'source': 'MediaDive', 'source_id': 'mediadive.medium:489', 'original_category': 'bacterial'}
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 489 | DSMZ Medium: 489 (mediadive.medium:489) | Aerobic: Yes
Composition
flowchart LR
CultureMech_005614["clostridium_aerotolerans_medium"]
ing0_K2HPO4["K2HPO4"]
CultureMech_005614 --> ing0_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing0_K2HPO4 -.-> CHEBI_131527
ing1_KH2PO4["KH2PO4"]
CultureMech_005614 --> ing1_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing1_KH2PO4 -.-> CHEBI_63036
ing2_NaCl["NaCl"]
CultureMech_005614 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3__NH4_2SO4["(NH4)2SO4"]
CultureMech_005614 --> ing3__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing3__NH4_2SO4 -.-> CHEBI_62946
ing4_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_005614 --> ing4_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing4_CaCl2_x_2_H2O -.-> CHEBI_86158
ing5_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_005614 --> ing5_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing5_MgSO4_x_7_H2O -.-> CHEBI_31795
ing6_Yeast_extract["Yeast extract"]
CultureMech_005614 --> ing6_Yeast_extract
ing7_Xylan["Xylan"]
CultureMech_005614 --> ing7_Xylan
CHEBI_37166["CHEBI:37166"]
ing7_Xylan -.-> CHEBI_37166
ing8_Sodium_resazurin["Sodium resazurin"]
CultureMech_005614 --> ing8_Sodium_resazurin
CHEBI_8806["CHEBI:8806"]
ing8_Sodium_resazurin -.-> CHEBI_8806
ing9_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
CultureMech_005614 --> ing9_L_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing9_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing10_Na2S_x_9_H2O["Na2S x 9 H2O"]
CultureMech_005614 --> ing10_Na2S_x_9_H2O
CHEBI_76209["CHEBI:76209"]
ing10_Na2S_x_9_H2O -.-> CHEBI_76209
Ingredients (11)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.22 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 2 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.22 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
0.45 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 4 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
0.45 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 5 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.06 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 6 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.09 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 7 | Yeast extract | 5 G_PER_L | ||
| 8 | Xylan | 5 G_PER_L |
CHEBI:37166
xylan
|
|
| 9 |
Sodium resazurin
C12H7NO4 229.191 g/mol
|
0.0005 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 10 |
L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.15 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
|
| 11 |
Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
|
0.15 G_PER_L |
CHEBI:76209
sodium sulfide nonahydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 3 source records.
- KOMODO_489_CLOSTRIDIUM_AEROTOLERANS_medium (CultureMech:005614)
- clostridium_aerotolerans_medium (CultureMech:003085)
- lacrimispora_medium (CultureMech:001616)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 489 |
| 2026-02-03T11:18:58.550985 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 489 |
| 2026-03-13T06:19:34.592448Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005614 |
| 2026-03-17T06:29:51.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:50.856972+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "CLOSTRIDIUM AEROTOLERANS medium" to "clostridium_aerotolerans_medium" for consistent matching |
| 2026-06-05T07:40:24.053348+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 9 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:45.134042+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:53.182482+00:00 | recipe-merger | Merged 3 duplicate recipes into canonical record | Sources: KOMODO_489_CLOSTRIDIUM_AEROTOLERANS_medium, clostridium_aerotolerans_medium, lacrimispora_medium |
| 2026-08-06T03:04:53.182538+00:00 | merge_recipes.py | MERGED_RECIPES | merged 3 source recipe(s) on fingerprint c8256712c5559b9462e88bdee3c509abcc755cd3c323ae49c37d41b969299d31 |