Overview
- External ontology
- komodo.medium:553 (source link unavailable) — GPHF-MEDIUM
- Applications
-
- Microbial cultivation
- pH
- 7.2
- Notes
- Source: KOMODO ModelSEED | ID: 553 | DSMZ Medium: 553 (mediadive.medium:553) | Aerobic: No
Composition
flowchart LR
CultureMech_006001["gphf_medium"]
ing0_Glucose["Glucose"]
CultureMech_006001 --> ing0_Glucose
CHEBI_17234["CHEBI:17234"]
ing0_Glucose -.-> CHEBI_17234
ing1_Casein_peptone["Casein peptone"]
CultureMech_006001 --> ing1_Casein_peptone
ing2_Yeast_extract["Yeast extract"]
CultureMech_006001 --> ing2_Yeast_extract
ing3_Beef_extract["Beef extract"]
CultureMech_006001 --> ing3_Beef_extract
ing4_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006001 --> ing4_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing4_CaCl2_x_2_H2O -.-> CHEBI_86158
ing5_Agar["Agar"]
CultureMech_006001 --> ing5_Agar
CHEBI_2509["CHEBI:2509"]
ing5_Agar -.-> CHEBI_2509
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Glucose
C6H12O6 180.156 g/mol
|
10 G_PER_L |
CHEBI:17234
glucose
|
|
| 2 | Casein peptone | 5 G_PER_L | ||
| 3 | Yeast extract | 5 G_PER_L | ||
| 4 | Beef extract | 5 G_PER_L | ||
| 5 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.74 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 6 | Agar | 20 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_553_GPHF-MEDIUM (CultureMech:006001)
- gphf_medium (CultureMech:001688)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 553 |
| 2026-02-03T11:19:14.735185 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 553 |
| 2026-03-13T06:19:37.535005Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006001 |
| 2026-03-17T06:30:41.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:54.328393+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "GPHF-MEDIUM" to "gphf_medium" for consistent matching |
| 2026-06-05T07:40:24.579763+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:04:55.444050+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_553_GPHF-MEDIUM, gphf_medium |
| 2026-08-06T03:04:55.444080+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint b77d3e5d33fab903adc3b03c33ab7df153bd47a35e7c0e271ad2baef82feaf94 |