Overview
- External ontology
- komodo.medium:606 (source link unavailable) — COLBY AND ZATHMAN MEDIUM
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 606 | DSMZ Medium: 606 (mediadive.medium:606) | Aerobic: No
Composition
flowchart LR
CultureMech_006095["colby_and_zathman_medium"]
ing0_K2HPO4["K2HPO4"]
CultureMech_006095 --> ing0_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing0_K2HPO4 -.-> CHEBI_131527
ing1_KH2PO4["KH2PO4"]
CultureMech_006095 --> ing1_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing1_KH2PO4 -.-> CHEBI_63036
ing2_CaCl2_x_6_H2O["CaCl2 x 6 H2O"]
CultureMech_006095 --> ing2_CaCl2_x_6_H2O
CHEBI_91243["CHEBI:91243"]
ing2_CaCl2_x_6_H2O -.-> CHEBI_91243
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_006095 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_NaCl["NaCl"]
CultureMech_006095 --> ing4_NaCl
CHEBI_26710["CHEBI:26710"]
ing4_NaCl -.-> CHEBI_26710
ing5__NH4_2SO4["(NH4)2SO4"]
CultureMech_006095 --> ing5__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing5__NH4_2SO4 -.-> CHEBI_62946
ing6_Agar["Agar"]
CultureMech_006095 --> ing6_Agar
CHEBI_2509["CHEBI:2509"]
ing6_Agar -.-> CHEBI_2509
ing7_Methanol["Methanol"]
CultureMech_006095 --> ing7_Methanol
CHEBI_17790["CHEBI:17790"]
ing7_Methanol -.-> CHEBI_17790
ing8_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
CultureMech_006095 --> ing8_CuSO4_x_5_H2O
CHEBI_31440["CHEBI:31440"]
ing8_CuSO4_x_5_H2O -.-> CHEBI_31440
ing9_MnSO4_x_5_H2O["MnSO4 x 5 H2O"]
CultureMech_006095 --> ing9_MnSO4_x_5_H2O
CHEBI_131524["CHEBI:131524"]
ing9_MnSO4_x_5_H2O -.-> CHEBI_131524
ing10_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_006095 --> ing10_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing10_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing11_H3BO3["H3BO3"]
CultureMech_006095 --> ing11_H3BO3
CHEBI_33118["CHEBI:33118"]
ing11_H3BO3 -.-> CHEBI_33118
ing12_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_006095 --> ing12_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing12_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing13_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_006095 --> ing13_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing13_CoCl2_x_6_H2O -.-> CHEBI_53503
ing14_FeCl3_x_6_H2O["FeCl3 x 6 H2O"]
CultureMech_006095 --> ing14_FeCl3_x_6_H2O
CHEBI_86254["CHEBI:86254"]
ing14_FeCl3_x_6_H2O -.-> CHEBI_86254
Ingredients (15)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
K2HPO4
HO4P.2K 174.174 g/mol
|
1.2 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 2 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.62 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 3 |
CaCl2 x 6 H2O
Ca.2Cl.6H2O 219.074 g/mol
|
0.05 G_PER_L |
CHEBI:91243
calcium chloride hexahydrate
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
NaCl
Cl.Na 58.443 g/mol
|
0.1 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 6 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
0.5 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 7 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
|
| 8 |
Methanol
CH4O 32.042 g/mol
|
1.584 G_PER_L |
CHEBI:17790
methanol
|
|
| 9 |
CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
|
0.005 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
|
| 10 |
MnSO4 x 5 H2O
5H2O.Mn.O4S 241.076 g/mol
|
0.01 G_PER_L |
CHEBI:131524
manganese(II) sulfate pentahydrate
|
|
| 11 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.01 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 12 |
H3BO3
H3BO3 61.833 g/mol
|
0.01 G_PER_L |
CHEBI:33118
boric acid
|
|
| 13 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.07 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 14 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.005 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 15 |
FeCl3 x 6 H2O
Cl3Fe.6H2O 270.294 g/mol
|
1 G_PER_L |
CHEBI:86254
iron trichloride hexahydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_606_COLBY_AND_ZATHMAN_MEDIUM (CultureMech:006095)
- colby_and_zathman_medium (CultureMech:001734)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 606 |
| 2026-02-03T11:18:55.914935 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 606 |
| 2026-03-13T06:19:38.223249Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006095 |
| 2026-03-17T06:29:44.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:55.113652+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "COLBY AND ZATHMAN MEDIUM" to "colby_and_zathman_medium" for consistent matching |
| 2026-06-05T07:40:24.895384+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 15 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:45.373594+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:56.073955+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_606_COLBY_AND_ZATHMAN_MEDIUM, colby_and_zathman_medium |
| 2026-08-06T03:04:56.073997+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 33d594c0e6e6e8b7e440a98827af62e1356d903c69c1ec0a15ad6e4d0e6588e1 |