Overview
- External ontology
- komodo.medium:747 (source link unavailable) — DSIC medium (modified)
- Applications
-
- Microbial cultivation
- pH range
- {'min': 7.0, 'max': 7.1}
- High-metal flag
- True
- Notes
- Source: KOMODO ModelSEED | ID: 747 | DSMZ Medium: 747 (mediadive.medium:747) | Aerobic: Yes
Composition
flowchart LR
CultureMech_006398["dsic_medium_modified"]
ing0_NaCl["NaCl"]
CultureMech_006398 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_NH4Cl["NH4Cl"]
CultureMech_006398 --> ing1_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing1_NH4Cl -.-> CHEBI_31206
ing2_KH2PO4["KH2PO4"]
CultureMech_006398 --> ing2_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing2_KH2PO4 -.-> CHEBI_63036
ing3_K2SO4["K2SO4"]
CultureMech_006398 --> ing3_K2SO4
CHEBI_32036["CHEBI:32036"]
ing3_K2SO4 -.-> CHEBI_32036
ing4_Na_acetate["Na-acetate"]
CultureMech_006398 --> ing4_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing4_Na_acetate -.-> CHEBI_32954
ing5_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
CultureMech_006398 --> ing5_Na2S2O3_x_5_H2O
CHEBI_32150["CHEBI:32150"]
ing5_Na2S2O3_x_5_H2O -.-> CHEBI_32150
ing6_Yeast_extract["Yeast extract"]
CultureMech_006398 --> ing6_Yeast_extract
ing7_Vitamin_B12["Vitamin B12"]
CultureMech_006398 --> ing7_Vitamin_B12
CHEBI_176843["CHEBI:176843"]
ing7_Vitamin_B12 -.-> CHEBI_176843
ing8_MOPS_buffer["MOPS buffer"]
CultureMech_006398 --> ing8_MOPS_buffer
CHEBI_44115["CHEBI:44115"]
ing8_MOPS_buffer -.-> CHEBI_44115
ing9_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_006398 --> ing9_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing9_MgCl2_x_6_H2O -.-> CHEBI_86345
ing10_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006398 --> ing10_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing10_CaCl2_x_2_H2O -.-> CHEBI_86158
ing11_NaHCO3["NaHCO3"]
CultureMech_006398 --> ing11_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing11_NaHCO3 -.-> CHEBI_32139
ing12_HCl["HCl"]
CultureMech_006398 --> ing12_HCl
CHEBI_17883["CHEBI:17883"]
ing12_HCl -.-> CHEBI_17883
ing13_FeCl2_x_4_H2O["FeCl2 x 4 H2O"]
CultureMech_006398 --> ing13_FeCl2_x_4_H2O
CHEBI_86249["CHEBI:86249"]
ing13_FeCl2_x_4_H2O -.-> CHEBI_86249
ing14_ZnCl2["ZnCl2"]
CultureMech_006398 --> ing14_ZnCl2
CHEBI_49976["CHEBI:49976"]
ing14_ZnCl2 -.-> CHEBI_49976
ing15_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_006398 --> ing15_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing15_MnCl2_x_4_H2O -.-> CHEBI_86368
ing16_H3BO3["H3BO3"]
CultureMech_006398 --> ing16_H3BO3
CHEBI_33118["CHEBI:33118"]
ing16_H3BO3 -.-> CHEBI_33118
ing17_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_006398 --> ing17_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing17_CoCl2_x_6_H2O -.-> CHEBI_53503
ing18_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
CultureMech_006398 --> ing18_CuCl2_x_2_H2O
CHEBI_86318["CHEBI:86318"]
ing18_CuCl2_x_2_H2O -.-> CHEBI_86318
ing19_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
CultureMech_006398 --> ing19_NiCl2_x_6_H2O
CHEBI_34887["CHEBI:34887"]
ing19_NiCl2_x_6_H2O -.-> CHEBI_34887
ing20_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_006398 --> ing20_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing20_Na2MoO4_x_2_H2O -.-> CHEBI_75213
Ingredients (21)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
129.938 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 2 |
NH4Cl
Cl.H4N 53.492 g/mol
|
0.519751 G_PER_L |
CHEBI:31206
ammonium chloride
|
|
| 3 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.623701 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 4 |
K2SO4
2K.O4S 174.259 g/mol
|
2.59875 G_PER_L |
CHEBI:32036
potassium sulfate
|
|
| 5 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
2.079 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 6 |
Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
|
0.10395 G_PER_L |
CHEBI:32150
sodium thiosulfate pentahydrate
|
|
| 7 | Yeast extract | 0.779626 G_PER_L | ||
| 8 | Vitamin B12 | 1 G_PER_L |
CHEBI:176843
vitamin B12
|
|
| 9 |
MOPS buffer
C7H15NO4S 209.267 g/mol
|
2.18295 G_PER_L |
CHEBI:44115
3-(N-morpholino)propanesulfonic acid
|
|
| 10 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
142.857 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 11 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
2.85714 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 12 |
NaHCO3
CHO3.Na 84.006 g/mol
|
83.3333 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
|
| 13 |
HCl
HCl 36.461 g/mol
|
2.5 G_PER_L |
CHEBI:17883
hydrogen chloride
|
|
| 14 |
FeCl2 x 4 H2O
Cl2Fe.4H2O 198.811 g/mol
|
1.5 G_PER_L |
CHEBI:86249
iron dichloride tetrahydrate
|
|
| 15 |
ZnCl2
2Cl.Zn 136.296 g/mol
|
0.07 G_PER_L |
CHEBI:49976
zinc dichloride
|
|
| 16 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.1 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 17 |
H3BO3
H3BO3 61.833 g/mol
|
0.006 G_PER_L |
CHEBI:33118
boric acid
|
|
| 18 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.19 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 19 |
CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
|
0.002 G_PER_L |
CHEBI:86318
copper(II) chloride dihydrate
|
|
| 20 |
NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
|
0.024 G_PER_L |
CHEBI:34887
nickel dichloride
|
|
| 21 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.036 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_747_DSIC_medium_modified (CultureMech:006398)
- dsic_medium_modified (CultureMech:001881)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 747 |
| 2026-02-03T11:19:04.870044 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 747 |
| 2026-03-13T06:19:40.441095Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006398 |
| 2026-03-17T06:30:10.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:57.743787+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "DSIC medium (modified)" to "dsic_medium_modified" for consistent matching |
| 2026-05-20T06:00:53.583108+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '7.0-7.1' -> {'min': 7.0, 'max': 7.1} |
| 2026-06-05T07:40:25.980189+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 20 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:45.733301+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 6 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:58.407643+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_747_DSIC_medium_modified, dsic_medium_modified |
| 2026-08-06T03:04:58.407682+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 840accb95ce7f45f29fa4d6bcc392f567e8834b11d445692efed0546e5160e22 |