Overview
- External ontology
- komodo.medium:823 (source link unavailable) — HALOBACULUM GOMORRENSE medium
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 823 | DSMZ Medium: 823 (mediadive.medium:823) | Aerobic: No
Composition
flowchart LR
CultureMech_006550["halobaculum_gomorrense_medium"]
ing0_NaCl["NaCl"]
CultureMech_006550 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_006550 --> ing1_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing1_MgCl2_x_6_H2O -.-> CHEBI_86345
ing2_K2SO4["K2SO4"]
CultureMech_006550 --> ing2_K2SO4
CHEBI_32036["CHEBI:32036"]
ing2_K2SO4 -.-> CHEBI_32036
ing3_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006550 --> ing3_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_x_2_H2O -.-> CHEBI_86158
ing4_Yeast_extract["Yeast extract"]
CultureMech_006550 --> ing4_Yeast_extract
ing5_Casamino_acids["Casamino acids"]
CultureMech_006550 --> ing5_Casamino_acids
ing6_Starch["Starch"]
CultureMech_006550 --> ing6_Starch
CHEBI_28017["CHEBI:28017"]
ing6_Starch -.-> CHEBI_28017
Ingredients (7)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
125 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 2 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
160 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 3 |
K2SO4
2K.O4S 174.259 g/mol
|
5 G_PER_L |
CHEBI:32036
potassium sulfate
|
|
| 4 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.1 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 5 | Yeast extract | 1 G_PER_L | ||
| 6 | Casamino acids | 1 G_PER_L | ||
| 7 | Starch | 2 G_PER_L |
CHEBI:28017
starch
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_823_HALOBACULUM_GOMORRENSE_medium (CultureMech:006550)
- halobaculum_gomorrense_medium (CultureMech:001971)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 823 |
| 2026-02-03T11:19:09.595067 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 823 |
| 2026-03-13T06:19:41.764171Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006550 |
| 2026-03-17T06:30:25.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:59.272289+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "HALOBACULUM GOMORRENSE medium" to "halobaculum_gomorrense_medium" for consistent matching |
| 2026-06-05T07:40:26.743589+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-08T23:19:28.613577+00:00 | chebi-regrounding-v1.0 | Corrected CHEBI ingredient grounding (audit G21/G22) | Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI). |
| 2026-06-10T07:46:45.993958+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:23.990750+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_823_HALOBACULUM_GOMORRENSE_medium, halobaculum_gomorrense_medium |
| 2026-08-06T03:04:23.990793+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 73b568160504a354f6b012148c2e3643d7975595e1ceb623ab032fbcb1afddad |