Overview
- External ontology
- komodo.medium:934 (source link unavailable) — THERMOCOCCUS WAIOTAPUENSE medium
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 934 | DSMZ Medium: 934 (mediadive.medium:934) | Aerobic: Yes
Composition
flowchart LR
CultureMech_006854["thermococcus_waiotapuense_medium"]
ing0_NaCl["NaCl"]
CultureMech_006854 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_Na2SO4["Na2SO4"]
CultureMech_006854 --> ing1_Na2SO4
CHEBI_32149["CHEBI:32149"]
ing1_Na2SO4 -.-> CHEBI_32149
ing2_KCl["KCl"]
CultureMech_006854 --> ing2_KCl
CHEBI_32588["CHEBI:32588"]
ing2_KCl -.-> CHEBI_32588
ing3_NaHCO3["NaHCO3"]
CultureMech_006854 --> ing3_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing3_NaHCO3 -.-> CHEBI_32139
ing4_KBr["KBr"]
CultureMech_006854 --> ing4_KBr
CHEBI_32030["CHEBI:32030"]
ing4_KBr -.-> CHEBI_32030
ing5_H3BO3["H3BO3"]
CultureMech_006854 --> ing5_H3BO3
CHEBI_33118["CHEBI:33118"]
ing5_H3BO3 -.-> CHEBI_33118
ing6_MgCl2["MgCl2"]
CultureMech_006854 --> ing6_MgCl2
CHEBI_6636["CHEBI:6636"]
ing6_MgCl2 -.-> CHEBI_6636
ing7_CaCl2["CaCl2"]
CultureMech_006854 --> ing7_CaCl2
CHEBI_3312["CHEBI:3312"]
ing7_CaCl2 -.-> CHEBI_3312
ing8_SrCl2["SrCl2"]
CultureMech_006854 --> ing8_SrCl2
CHEBI_36383["CHEBI:36383"]
ing8_SrCl2 -.-> CHEBI_36383
ing9_Tryptone["Tryptone"]
CultureMech_006854 --> ing9_Tryptone
ing10_Yeast_extract["Yeast extract"]
CultureMech_006854 --> ing10_Yeast_extract
ing11_Na2S_x_9_H2O["Na2S x 9 H2O"]
CultureMech_006854 --> ing11_Na2S_x_9_H2O
CHEBI_76209["CHEBI:76209"]
ing11_Na2S_x_9_H2O -.-> CHEBI_76209
ing12_Resazurin["Resazurin"]
CultureMech_006854 --> ing12_Resazurin
CHEBI_8806["CHEBI:8806"]
ing12_Resazurin -.-> CHEBI_8806
ing13_Sulphur["Sulphur"]
CultureMech_006854 --> ing13_Sulphur
CHEBI_17909["CHEBI:17909"]
ing13_Sulphur -.-> CHEBI_17909
Ingredients (14)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
1.5 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 2 |
Na2SO4
2Na.O4S 142.043 g/mol
|
4 G_PER_L |
CHEBI:32149
sodium sulfate
|
|
| 3 |
KCl
Cl.K 74.551 g/mol
|
0.7 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 4 |
NaHCO3
CHO3.Na 84.006 g/mol
|
0.2 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
|
| 5 |
KBr
Br.K 119.002 g/mol
|
0.1 G_PER_L |
CHEBI:32030
potassium bromide
|
|
| 6 |
H3BO3
H3BO3 61.833 g/mol
|
0.03 G_PER_L |
CHEBI:33118
boric acid
|
|
| 7 |
MgCl2
2Cl.Mg 95.211 g/mol
|
5.8 G_PER_L |
CHEBI:6636
magnesium dichloride
|
|
| 8 |
CaCl2
Ca.2Cl 110.984 g/mol
|
1.5 G_PER_L |
CHEBI:3312
calcium dichloride
|
|
| 9 |
SrCl2
2Cl.Sr 158.526 g/mol
|
0.025 G_PER_L |
CHEBI:36383
strontium dichloride
|
|
| 10 | Tryptone | 5 G_PER_L | ||
| 11 | Yeast extract | 1 G_PER_L | ||
| 12 |
Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
|
0.75 G_PER_L |
CHEBI:76209
sodium sulfide nonahydrate
|
|
| 13 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.002 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 14 |
Sulphur
(S)n.S2 96.201 g/mol
|
10 G_PER_L |
CHEBI:17909
polysulfur
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_934_THERMOCOCCUS_WAIOTAPUENSE_medium (CultureMech:006854)
- thermococcus_waiotapuense_medium (CultureMech:002107)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 934 |
| 2026-02-03T11:18:57.704605 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 934 |
| 2026-03-13T06:19:44.368689Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006854 |
| 2026-03-17T06:29:49.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:02.281417+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "THERMOCOCCUS WAIOTAPUENSE medium" to "thermococcus_waiotapuense_medium" for consistent matching |
| 2026-06-05T07:40:27.964191+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 12 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:46.451088+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:24.354307+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_934_THERMOCOCCUS_WAIOTAPUENSE_medium, thermococcus_waiotapuense_medium |
| 2026-08-06T03:04:24.354357+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 95ae1d866ea401d2d23a2df7ee90082b0ef5a0d825f7ed00b6d8c9df030b5043 |