Overview
- External ontology
- TOGO:M1336 — Anaerobaculum Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M1336 Original source: JCM - JCM_M1242 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1242
Composition
flowchart LR
CultureMech_007872["anaerobaculum_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_007872 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_007872 --> ing1_Yeast_extract
ing2_NaCl["NaCl"]
CultureMech_007872 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_Resazurin["Resazurin"]
CultureMech_007872 --> ing3_Resazurin
CHEBI_8806["CHEBI:8806"]
ing3_Resazurin -.-> CHEBI_8806
ing4_Trypticase_peptone["Trypticase peptone"]
CultureMech_007872 --> ing4_Trypticase_peptone
ing5_Peptone["Peptone"]
CultureMech_007872 --> ing5_Peptone
ing6_N2["N2"]
CultureMech_007872 --> ing6_N2
CHEBI_17997["CHEBI:17997"]
ing6_N2 -.-> CHEBI_17997
Ingredients (7)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
960 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound |
| 2 | Yeast extract | 10 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
8 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 4 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.5 G_PER_L |
CHEBI:8806
Resazurin
|
Role: pH dependent redox indicator; Properties: Simple component, Organic compound, Defined component |
| 5 | Trypticase peptone | 5 G_PER_L | Properties: Undefined component | |
| 6 | Peptone | 5 G_PER_L | ||
| 7 |
N2
N2 28.014 g/mol
|
variable VARIABLE |
CHEBI:17997
dinitrogen
|
Properties: ガス |
Solutions
Salt solution (see Medium [M695])
Dose: 40 G_PER_L
Cross-reference to Medium M695
5% L-Cysteine・HCl・H2O solution
Dose: 10 G_PER_L
Properties: Defined component, Solution, Organic compound
1 M Glucose solution
Dose: 6 G_PER_L
Role: Carbon source; Properties: Defined component, Organic compound, Solution
1 M Na2S2O3 solution
Dose: 10 G_PER_L
Properties: Defined component, Inorganic compound, Solution
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M1336_Anaerobaculum_Medium (CultureMech:007872)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:54.375444Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M1336 |
| 2026-01-28T19:48:22.518997Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: N2; Added default concentration for ingredient: N2 |
| 2026-03-09T08:04:37.573195+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 4 solution(s) from ingredients |
| 2026-03-13T03:09:07.262694Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:19:52.097168Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:007872 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name; Added default solution name; Added default solution name; Added default solution name |
| 2026-03-17T06:30:13.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:10.545838+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Anaerobaculum Medium" to "anaerobaculum_medium" for consistent matching |
| 2026-05-16T09:03:09.457664+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=2 |
| 2026-06-05T07:40:32.426523+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:08.085542+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint b7d7697f883320aaf6f36c60cfc333cbd8c89f367be5feaa0b588f172ea7088b |