Overview
- External ontology
- TOGO:M1653 — Potato Dextrose Agar (PDA)
- Applications
-
- Microbial cultivation
- Synonyms
-
- {'name': 'pda_hygromycin_medium', 'source': 'TOGO', 'source_id': 'TOGO:M1954', 'original_category': 'bacterial'}
- {'name': 'pda_ph_3_0', 'source': 'TOGO', 'source_id': 'TOGO:M1870', 'original_category': 'bacterial'}
- Notes
- Source: https://togomedium.org/medium/M1653 Original source: NBRC - NBRC_M856 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=856
Composition
flowchart LR
CultureMech_008210["potato_dextrose_agar_pda"]
ing0_Distilled_water["Distilled water"]
CultureMech_008210 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Glucose["Glucose"]
CultureMech_008210 --> ing1_Glucose
CHEBI_17234["CHEBI:17234"]
ing1_Glucose -.-> CHEBI_17234
ing2_Agar["Agar"]
CultureMech_008210 --> ing2_Agar
CHEBI_2509["CHEBI:2509"]
ing2_Agar -.-> CHEBI_2509
ing3_Potato["Potato"]
CultureMech_008210 --> ing3_Potato
Ingredients (4)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
Glucose
C6H12O6 180.156 g/mol
|
10 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 3 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Role: Solidifying component |
| 4 | Potato | 200 G_PER_L | Properties: Undefined component |
Target organisms
No target organisms are recorded.
Provenance
Merged from 3 source records.
- pda_hygromycin_medium (CultureMech:008534)
- pda_ph_3_0 (CultureMech:008445)
- potato_dextrose_agar_pda (CultureMech:008210)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:58.061123Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M1653 |
| 2026-01-28T19:48:23.081353Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:19:54.491833Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:008210 |
| 2026-03-17T06:30:14.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:13.089845+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Potato Dextrose Agar (PDA)" to "potato_dextrose_agar_pda" for consistent matching |
| 2026-06-05T07:41:42.382930+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:52.332067+00:00 | recipe-merger | Merged 3 duplicate recipes into canonical record | Sources: pda_hygromycin_medium, pda_ph_3_0, potato_dextrose_agar_pda |
| 2026-08-06T03:05:52.332219+00:00 | merge_recipes.py | MERGED_RECIPES | merged 3 source recipe(s) on fingerprint e038f24061d70e02f78535a7846f7717ea2c563c3e7926732b125218101f3adf |