Overview
- External ontology
- TOGO:M675 — Pelagicoccus Agar
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M675 Original source: JCM - JCM_M659 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=659
Composition
flowchart LR
CultureMech_010079["pelagicoccus_agar"]
ing0_Distilled_water["Distilled water"]
CultureMech_010079 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Marine_agar_2216__BD_Difco_["Marine agar 2216 (BD-Difco)"]
CultureMech_010079 --> ing1_Marine_agar_2216__BD_Difco_
ing2_R2A_agar__BD_Difco_["R2A agar (BD-Difco)"]
CultureMech_010079 --> ing2_R2A_agar__BD_Difco_
ing3_Artificial_seawater__see_below_["Artificial seawater (see below)"]
CultureMech_010079 --> ing3_Artificial_seawater__see_below_
ing4_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_010079 --> ing4_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing4_MgSO4_7H2O -.-> CHEBI_31795
ing5_NaCl["NaCl"]
CultureMech_010079 --> ing5_NaCl
CHEBI_26710["CHEBI:26710"]
ing5_NaCl -.-> CHEBI_26710
ing6_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_010079 --> ing6_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing6_CaCl2_2H2O -.-> CHEBI_86158
ing7_MgCl2_6H2O["MgCl2·6H2O"]
CultureMech_010079 --> ing7_MgCl2_6H2O
CHEBI_86345["CHEBI:86345"]
ing7_MgCl2_6H2O -.-> CHEBI_86345
ing8_KCl["KCl"]
CultureMech_010079 --> ing8_KCl
CHEBI_32588["CHEBI:32588"]
ing8_KCl -.-> CHEBI_32588
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
251.0 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Inorganic compound, Simple component, Defined component [Merged 2 duplicates: 250.0, 1.0] |
| 2 | Marine agar 2216 (BD-Difco) | 55.1 G_PER_L | Properties: Undefined component | |
| 3 | R2A agar (BD-Difco) | 9.1 G_PER_L | Properties: Undefined component, Complex component | |
| 4 | Artificial seawater (see below) | 750 G_PER_L | ||
| 5 |
MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
|
7 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 6 |
NaCl
Cl.Na 58.443 g/mol
|
24 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 7 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.1 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 8 |
MgCl2·6H2O
2Cl.6H2O.Mg 203.301 g/mol
|
5.3 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 9 |
KCl
Cl.K 74.551 g/mol
|
0.7 G_PER_L |
CHEBI:32588
potassium chloride
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M675_Pelagicoccus_Agar (CultureMech:010079)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.510041Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M675 |
| 2026-01-28T19:48:08.059163Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T03:08:39.902130Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:20:11.159597Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:010079 |
| 2026-03-17T06:29:41.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:30.084933+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Pelagicoccus Agar" to "pelagicoccus_agar" for consistent matching |
| 2026-06-05T07:40:43.470144+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:32.259429+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-08-06T03:05:18.317383+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint fbdf115e1f7bfbbbcffe70653a0d6b40dfc02445ef1508e58b12252bb260c209 |