Overview
- External ontology
- TOGO:M935 — Microaerophilic Thermus Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M935 Original source: JCM - JCM_M894 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=894
Composition
flowchart LR
CultureMech_010357["microaerophilic_thermus_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_010357 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_010357 --> ing1_Yeast_extract__BD_Difco_
ing2_Tryptone__BD_Difco_["Tryptone (BD-Difco)"]
CultureMech_010357 --> ing2_Tryptone__BD_Difco_
ing3_NaOH["NaOH"]
CultureMech_010357 --> ing3_NaOH
CHEBI_32145["CHEBI:32145"]
ing3_NaOH -.-> CHEBI_32145
ing4_Nitrogen_gas["Nitrogen gas"]
CultureMech_010357 --> ing4_Nitrogen_gas
CHEBI_17997["CHEBI:17997"]
ing4_Nitrogen_gas -.-> CHEBI_17997
ing5_Oxygen_gas["Oxygen gas"]
CultureMech_010357 --> ing5_Oxygen_gas
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
900 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 | Yeast extract (BD-Difco) | 1 G_PER_L | Properties: Undefined component | |
| 3 | Tryptone (BD-Difco) | 1 G_PER_L | Properties: Undefined component | |
| 4 |
NaOH
HO.Na 39.997 g/mol
|
variable VARIABLE |
CHEBI:32145
sodium hydroxide
|
Properties: Defined component, Inorganic compound, Solution |
| 5 |
Nitrogen gas
N2 28.014 g/mol
|
variable VARIABLE |
CHEBI:17997
dinitrogen
|
Properties: Gas |
| 6 | Oxygen gas | variable VARIABLE | Properties: Gas |
Solutions
Castenholz basal salt solution (see Medium [M266])
Dose: 100 G_PER_L
Cross-reference to Medium M266
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M935_Microaerophilic_Thermus_Medium (CultureMech:010357)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.990789Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M935 |
| 2026-01-28T19:48:10.008481Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: NaOH; Added default concentration for ingredient: Nitrogen gas; Added default concentration for ingredient: Oxygen gas |
| 2026-03-09T08:04:16.290437+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 1 solution(s) from ingredients |
| 2026-03-13T06:20:13.244379Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:010357 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name |
| 2026-03-17T06:29:46.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:32.222682+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Microaerophilic Thermus Medium" to "microaerophilic_thermus_medium" for consistent matching |
| 2026-05-16T09:03:22.147263+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=2 |
| 2026-06-05T07:40:45.830977+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:20.615673+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 96d8cfe794dc35274269345b5986500f03b34a2132b208a3444f93f9abecabbc |