Overview
- External ontology
- TOGO:M978 — Oscillibacter GH Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M978 Original source: JCM - JCM_M932 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=932
Composition
flowchart LR
CultureMech_010404["oscillibacter_gh_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_010404 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Tween_80["Tween 80"]
CultureMech_010404 --> ing1_Tween_80
CHEBI_53426["CHEBI:53426"]
ing1_Tween_80 -.-> CHEBI_53426
ing2_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_010404 --> ing2_Yeast_extract__BD_Difco_
ing3_Polypeptone_peptone__BD_BBL_["Polypeptone peptone (BD-BBL)"]
CultureMech_010404 --> ing3_Polypeptone_peptone__BD_BBL_
ing4_N2["N2"]
CultureMech_010404 --> ing4_N2
CHEBI_17997["CHEBI:17997"]
ing4_N2 -.-> CHEBI_17997
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
Tween 80
(C2H4O)w.(C2H4O)x.(C2H4O)y.(C2H4O)z.C24H44O6 604.822 g/mol
|
0.03 G_PER_L |
CHEBI:53426
polysorbate 80
|
Role: Surfactant; Properties: Defined component, Simple component, Organic compound |
| 3 | Yeast extract (BD-Difco) | 5 G_PER_L | Properties: Undefined component | |
| 4 | Polypeptone peptone (BD-BBL) | 5 G_PER_L | Properties: Undefined component | |
| 5 |
N2
N2 28.014 g/mol
|
variable VARIABLE |
CHEBI:17997
dinitrogen
|
Properties: Gas |
Solutions
Trace vitamins (see Medium [M190])
Dose: 10 G_PER_L
Cross-reference to Medium M190
FeCl2 solution (see Medium [M180])
Dose: 1 G_PER_L
Cross-reference to Medium M180
Trace element solution (see Medium [M180])
Dose: 1 G_PER_L
Cross-reference to Medium M180
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M978_Oscillibacter_GH_Medium (CultureMech:010404)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:56.072024Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M978 |
| 2026-01-28T19:48:09.704380Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: N2 |
| 2026-03-09T08:04:15.744400+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 3 solution(s) from ingredients |
| 2026-03-13T06:20:13.600590Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:010404 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name; Added default solution name; Added default solution name |
| 2026-03-17T06:29:45.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:32.573960+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Oscillibacter GH Medium" to "oscillibacter_gh_medium" for consistent matching |
| 2026-05-16T09:03:22.484861+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=2 |
| 2026-06-05T07:40:46.214671+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:20.982474+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 35c84d912adb0e0c75b06d2d5e6b2fc9702aea96b2a799afad063b624aca42ea |