pmx_108_medium

CultureMech:015869 bacterial COMPLEX LIQUID
Original name: PMX.108 MEDIUM

Overview

External ontology
jcm.grmd:1445 (source link unavailable) — PMX.108 MEDIUM
Applications
  • Microbial cultivation
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1445

Composition

flowchart LR
    CultureMech_015869["pmx_108_medium"]
    ing0_NH4Cl["NH4Cl"]
    CultureMech_015869 --> ing0_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing0_NH4Cl -.-> CHEBI_31206
    ing1_KH2PO4["KH2PO4"]
    CultureMech_015869 --> ing1_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing1_KH2PO4 -.-> CHEBI_63036
    ing2_MgCl2_6H2O["MgCl2•6H2O"]
    CultureMech_015869 --> ing2_MgCl2_6H2O
    ing3_CaCl2_2H2O["CaCl2•2H2O"]
    CultureMech_015869 --> ing3_CaCl2_2H2O
    ing4_Sodium_aceate_3H2O["Sodium aceate•3H2O"]
    CultureMech_015869 --> ing4_Sodium_aceate_3H2O
    ing5_Yeast_extract["Yeast extract"]
    CultureMech_015869 --> ing5_Yeast_extract
    ing6_Casamino_acids__BD_Difico_["Casamino acids (BD-Difico)"]
    CultureMech_015869 --> ing6_Casamino_acids__BD_Difico_
    ing7_Tryptone__BD_Difico_["Tryptone (BD-Difico)"]
    CultureMech_015869 --> ing7_Tryptone__BD_Difico_
    ing8_Trace_mineral_solution__see_Medium_No__852__["Trace mineral solution (see Medium No. 852 )"]
    CultureMech_015869 --> ing8_Trace_mineral_solution__see_Medium_No__852__
    ing9_Se_W_solution__see_below_["Se/W solution (see below)"]
    CultureMech_015869 --> ing9_Se_W_solution__see_below_
    ing10_Trace_vitamins_solution__see_Medium_No__284__["Trace vitamins solution (see Medium No. 284 )"]
    CultureMech_015869 --> ing10_Trace_vitamins_solution__see_Medium_No__284__
    ing11_Resazurin["Resazurin"]
    CultureMech_015869 --> ing11_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing11_Resazurin -.-> CHEBI_8806
    ing12_Distilled_water["Distilled water"]
    CultureMech_015869 --> ing12_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing12_Distilled_water -.-> CHEBI_15377
    ing13_8__NaHCO3_solution_["8% NaHCO3 solution*"]
    CultureMech_015869 --> ing13_8__NaHCO3_solution_
    ing14_5__L_Cysteine_HCl_H2O_solution["5% L-Cysteine•HCl•H2O solution"]
    CultureMech_015869 --> ing14_5__L_Cysteine_HCl_H2O_solution
    ing15_5__Na2S_9H2O_solution["5% Na2S•9H2O solution"]
    CultureMech_015869 --> ing15_5__Na2S_9H2O_solution
    ing16_Na2SeO3["Na2SeO3"]
    CultureMech_015869 --> ing16_Na2SeO3
    CHEBI_48843["CHEBI:48843"]
    ing16_Na2SeO3 -.-> CHEBI_48843
    ing17_Na2WO4_2H2O["Na2WO4•2H2O"]
    CultureMech_015869 --> ing17_Na2WO4_2H2O
    ing18_Distilled_water["Distilled water"]
    CultureMech_015869 --> ing18_Distilled_water
    ing18_Distilled_water -.-> CHEBI_15377

Ingredients (19)

# Ingredient Concentration Ontology Notes
1 NH4Cl
Cl.H4N 53.492 g/mol
0.54 G_PER_L CHEBI:31206
ammonium chloride
2 KH2PO4
H2O4P.K 136.084 g/mol
0.14 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
3 MgCl2•6H2O 0.2 G_PER_L
4 CaCl2•2H2O 0.15 G_PER_L
5 Sodium aceate•3H2O 1.36 G_PER_L
6 Yeast extract 0.09 G_PER_L
7 Casamino acids (BD-Difico) 0.5 G_PER_L
8 Tryptone (BD-Difico) 1.5 G_PER_L
9 Trace mineral solution (see Medium No. 852 ) 1.0 ML_PER_L
10 Se/W solution (see below) 1.0 ML_PER_L
11 Trace vitamins solution (see Medium No. 284 ) 2.0 ML_PER_L
12 Resazurin
C12H7NO4 229.191 g/mol
1.0 MG_PER_L CHEBI:8806
Resazurin
13 Distilled water
H2O 18.015 g/mol
970.0 ML_PER_L CHEBI:15377
water
14 8% NaHCO3 solution* 30.0 ML_PER_L
15 5% L-Cysteine•HCl•H2O solution 4.0 ML_PER_L
16 5% Na2S•9H2O solution 4.0 ML_PER_L
17 Na2SeO3
2Na.O3Se 172.937 g/mol
2.0 MG_PER_L CHEBI:48843
disodium selenite
18 Na2WO4•2H2O 1.0 MG_PER_L
19 Distilled water
H2O 18.015 g/mol
1.0 ML_PER_L CHEBI:15377
water

Preparation

  1. Mix components thoroughly, bring to a boil, and cool down under a N2-CO2 (4:1, v/v) gas stream.
  2. Distribute the medium into culture vessels under the same gas mixture (e. g., 20 ml medium in 60 ml serum bottles), seal with butyl rubber stoppers and inject 10-20% gas-phase volume of H2, and autoclave.

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-06-02T07:09:20.624232+00:00 jcm-grmd-import Scraped from JCM GRMD database Direct import from JCM GRMD=1445. Ingredients captured verbatim; CHEBI/MediaIngredientMech enrichment and category (bacterial/archaea) review are downstream steps.
2026-06-03T02:00:03.501087Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-06-03T07:12:22.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-08-06T03:04:35.690478+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint ab1bea59d44e4abf5327bd7c218e2bd5271a0c53d732aebdc4eeb83fd2163023