Overview
- External ontology
- mediadive.medium:C5 (source link unavailable) — ASW + barley
- Applications
-
- Microbial cultivation
- pH range
- {'min': 7.6, 'max': 7.8}
- Notes
- Source: CCAP | Link: https://www.ccap.ac.uk/wp-content/uploads/MR_ASW_Barley.pdf
Composition
flowchart LR
CultureMech_000371["asw_barley"]
ing0_Tricine["Tricine"]
CultureMech_000371 --> ing0_Tricine
CHEBI_46760["CHEBI:46760"]
ing0_Tricine -.-> CHEBI_46760
ing1_Natural_sea_water["Natural sea water"]
CultureMech_000371 --> ing1_Natural_sea_water
ing2_NaNO3["NaNO3"]
CultureMech_000371 --> ing2_NaNO3
CHEBI_63005["CHEBI:63005"]
ing2_NaNO3 -.-> CHEBI_63005
ing3_Na2HPO4["Na2HPO4"]
CultureMech_000371 --> ing3_Na2HPO4
CHEBI_34683["CHEBI:34683"]
ing3_Na2HPO4 -.-> CHEBI_34683
ing4_K2HPO4["K2HPO4"]
CultureMech_000371 --> ing4_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing4_K2HPO4 -.-> CHEBI_131527
ing5_Biotin["Biotin"]
CultureMech_000371 --> ing5_Biotin
CHEBI_15956["CHEBI:15956"]
ing5_Biotin -.-> CHEBI_15956
ing6_Calcium_pantothenate["Calcium pantothenate"]
CultureMech_000371 --> ing6_Calcium_pantothenate
CHEBI_31345["CHEBI:31345"]
ing6_Calcium_pantothenate -.-> CHEBI_31345
ing7_Cyanocobalamine["Cyanocobalamine"]
CultureMech_000371 --> ing7_Cyanocobalamine
CHEBI_17439["CHEBI:17439"]
ing7_Cyanocobalamine -.-> CHEBI_17439
ing8_Folic_acid["Folic acid"]
CultureMech_000371 --> ing8_Folic_acid
CHEBI_27470["CHEBI:27470"]
ing8_Folic_acid -.-> CHEBI_27470
ing9_Inositol["Inositol"]
CultureMech_000371 --> ing9_Inositol
CHEBI_24848["CHEBI:24848"]
ing9_Inositol -.-> CHEBI_24848
ing10_Nicotinic_acid["Nicotinic acid"]
CultureMech_000371 --> ing10_Nicotinic_acid
CHEBI_15940["CHEBI:15940"]
ing10_Nicotinic_acid -.-> CHEBI_15940
ing11_Thiamine_HCl["Thiamine HCl"]
CultureMech_000371 --> ing11_Thiamine_HCl
CHEBI_49105["CHEBI:49105"]
ing11_Thiamine_HCl -.-> CHEBI_49105
ing12_Thymine["Thymine"]
CultureMech_000371 --> ing12_Thymine
CHEBI_17821["CHEBI:17821"]
ing12_Thymine -.-> CHEBI_17821
ing13_Soil_extract["Soil extract"]
CultureMech_000371 --> ing13_Soil_extract
Ingredients (14)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Tricine | 0.5 G_PER_L |
CHEBI:46760
tricine
|
|
| 2 | Natural sea water | 1000 G_PER_L | ||
| 3 |
NaNO3
NO3.Na 84.994 g/mol
|
30 G_PER_L |
CHEBI:63005
sodium nitrate
|
|
| 4 |
Na2HPO4
HO4P.2Na 141.958 g/mol
|
1.2 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
|
| 5 |
K2HPO4
HO4P.2K 174.174 g/mol
|
1 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 6 |
Biotin
C10H16N2O3S 244.316 g/mol
|
0.0002 G_PER_L |
CHEBI:15956
biotin
|
|
| 7 |
Calcium pantothenate
2C9H16NO5.Ca 476.536 g/mol
|
0.02 G_PER_L |
CHEBI:31345
Calcium pantothenate
|
|
| 8 |
Cyanocobalamine
C63H88CoN14O14P 1355.388 g/mol
|
0.004 G_PER_L |
CHEBI:17439
cyanocob(III)alamin
|
|
| 9 |
Folic acid
C19H19N7O6 441.404 g/mol
|
0.0004 G_PER_L |
CHEBI:27470
folic acid
|
|
| 10 |
Inositol
C6H12O6 180.156 g/mol
|
1 G_PER_L |
CHEBI:24848
inositol
|
|
| 11 |
Nicotinic acid
C6H5NO2 123.111 g/mol
|
0.02 G_PER_L |
CHEBI:15940
nicotinic acid
|
|
| 12 |
Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
|
0.1 G_PER_L |
CHEBI:49105
thiamine hydrochloride
|
|
| 13 |
Thymine
C5H6N2O2 126.115 g/mol
|
0.6 G_PER_L |
CHEBI:17821
thymine
|
|
| 14 | Soil extract | variable VARIABLE |
Preparation
- Make up to 1 Litre with filtered natural seawater. Adjust pH to 7.6 – 7.8 with 1M NaOH or 1M HCl. Add approximately 1 grain of barley to each 25ml of prepared medium prior to autoclaving. Autoclave at 15 psi for 15 minutes.
- Alternatively, use: Distilled water to 1 Litre and “Ultramarine Synthetica” sea salts 33.60g
- Site selection for a good soil is very important and for most purposes a soil from undisturbed deciduous woodland is best. Sites to avoid are those showing obvious signs of man's activity and particular care should be taken to avoid areas where fertilizers, crop sprays or other toxic chemicals may have been used.
- A rich loam with good crumb structure should be sought. Stones, roots and larger invertebrates should be removed during an initial sieving through a 1 cm mesh. The sieved soil should be spread to air dry and handpicked for smaller invertebrates and roots. It should be turned periodically and picked over again. When dry sieve through a finer mesh (2-4 mm) and store in an airtight container away from light and heat.
- Soil is prepared as above. Air-dried soil and twice its volume of supernatant distilled water are autoclaved together at 15 psi for 2 hours and left to cool. The supernatant is then decanted and then distributed to containers in volumes suitable for making up batches of media. The aliquots and their containers are autoclaved for an appropriate length of time (e.g. 1 litre or less for 15 minutes) and are then kept in a cool place (e.g. a refrigerator) until required.
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-26T17:53:19.484535Z | mediadive-import | Imported from MediaDive | Source: CCAP, ID: C5 |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: Soil extract |
| 2026-03-13T06:18:54.824743Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:000371 |
| 2026-03-17T06:30:53.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:05.832709+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "ASW + barley" to "asw_barley" for consistent matching |
| 2026-05-16T09:03:25.076430+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-05-20T06:01:09.245957+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '7.6-7.8' -> {'min': 7.6, 'max': 7.8} |
| 2026-06-05T07:40:49.956663+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 10 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:53.601166+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |