archaeoglobus_infectus_medium

CultureMech:000529 archaea COMPLEX LIQUID
Original name: ARCHAEOGLOBUS INFECTUS MEDIUM

Overview

External ontology
mediadive.medium:1098 (source link unavailable) — ARCHAEOGLOBUS INFECTUS MEDIUM
Applications
  • Microbial cultivation
pH
6.5
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1098.pdf

Composition

flowchart LR
    CultureMech_000529["archaeoglobus_infectus_medium"]
    ing0_Sea_Salt["Sea Salt"]
    CultureMech_000529 --> ing0_Sea_Salt
    ing1_NH4Cl["NH4Cl"]
    CultureMech_000529 --> ing1_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing1_NH4Cl -.-> CHEBI_31206
    ing2_KH2PO4["KH2PO4"]
    CultureMech_000529 --> ing2_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing2_KH2PO4 -.-> CHEBI_63036
    ing3_Na_acetate["Na-acetate"]
    CultureMech_000529 --> ing3_Na_acetate
    CHEBI_32954["CHEBI:32954"]
    ing3_Na_acetate -.-> CHEBI_32954
    ing4_Yeast_extract["Yeast extract"]
    CultureMech_000529 --> ing4_Yeast_extract
    ing5_Sodium_resazurin["Sodium resazurin"]
    CultureMech_000529 --> ing5_Sodium_resazurin
    CHEBI_8806["CHEBI:8806"]
    ing5_Sodium_resazurin -.-> CHEBI_8806
    ing6_NaHCO3["NaHCO3"]
    CultureMech_000529 --> ing6_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing6_NaHCO3 -.-> CHEBI_32139
    ing7_2_Mercaptoethanesulfonate["2-Mercaptoethanesulfonate"]
    CultureMech_000529 --> ing7_2_Mercaptoethanesulfonate
    CHEBI_17905["CHEBI:17905"]
    ing7_2_Mercaptoethanesulfonate -.-> CHEBI_17905
    ing8_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
    CultureMech_000529 --> ing8_Na2S2O3_x_5_H2O
    CHEBI_32150["CHEBI:32150"]
    ing8_Na2S2O3_x_5_H2O -.-> CHEBI_32150
    ing9_DL_Dithiothreitol["DL-Dithiothreitol"]
    CultureMech_000529 --> ing9_DL_Dithiothreitol
    CHEBI_18320["CHEBI:18320"]
    ing9_DL_Dithiothreitol -.-> CHEBI_18320
    ing10_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_000529 --> ing10_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing10_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing11_NaCl["NaCl"]
    CultureMech_000529 --> ing11_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing11_NaCl -.-> CHEBI_26710
    ing12_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_000529 --> ing12_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing12_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing13_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_000529 --> ing13_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing13_CuSO4_x_5_H2O -.-> CHEBI_31440
    ing14_AlK_SO4_2_x_12_H2O["AlK(SO4)2 x 12 H2O"]
    CultureMech_000529 --> ing14_AlK_SO4_2_x_12_H2O
    CHEBI_86465["CHEBI:86465"]
    ing14_AlK_SO4_2_x_12_H2O -.-> CHEBI_86465
    ing15_H3BO3["H3BO3"]
    CultureMech_000529 --> ing15_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing15_H3BO3 -.-> CHEBI_33118
    ing16_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_000529 --> ing16_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing16_Na2MoO4_x_2_H2O -.-> CHEBI_75213
    ing17__NH4_2Ni_SO4_2_x_6_H2O["(NH4)2Ni(SO4)2 x 6 H2O"]
    CultureMech_000529 --> ing17__NH4_2Ni_SO4_2_x_6_H2O
    CHEBI_86149["CHEBI:86149"]
    ing17__NH4_2Ni_SO4_2_x_6_H2O -.-> CHEBI_86149
    ing18_Na2WO4_x_2_H2O["Na2WO4 x 2 H2O"]
    CultureMech_000529 --> ing18_Na2WO4_x_2_H2O
    CHEBI_63939["CHEBI:63939"]
    ing18_Na2WO4_x_2_H2O -.-> CHEBI_63939
    ing19_Na2SeO4["Na2SeO4"]
    CultureMech_000529 --> ing19_Na2SeO4
    CHEBI_77775["CHEBI:77775"]
    ing19_Na2SeO4 -.-> CHEBI_77775
    ing20_p_Aminobenzoic_acid["p-Aminobenzoic acid"]
    CultureMech_000529 --> ing20_p_Aminobenzoic_acid
    CHEBI_30753["CHEBI:30753"]
    ing20_p_Aminobenzoic_acid -.-> CHEBI_30753
    ing21_D_____biotin["D-(+)-biotin"]
    CultureMech_000529 --> ing21_D_____biotin
    CHEBI_15956["CHEBI:15956"]
    ing21_D_____biotin -.-> CHEBI_15956
    ing22_Calcium_pantothenate["Calcium pantothenate"]
    CultureMech_000529 --> ing22_Calcium_pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing22_Calcium_pantothenate -.-> CHEBI_31345

Ingredients (23)

# Ingredient Concentration Ontology Notes
1 Sea Salt 34.9301 G_PER_L
2 NH4Cl
Cl.H4N 53.492 g/mol
0.0998004 G_PER_L CHEBI:31206
ammonium chloride
3 KH2PO4
H2O4P.K 136.084 g/mol
0.0499002 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
4 Na-acetate
C2H3O2.Na 82.034 g/mol
1.59681 G_PER_L CHEBI:32954
sodium acetate
5 Yeast extract 0.0998004 G_PER_L
6 Sodium resazurin
C12H7NO4 229.191 g/mol
0.000499002 G_PER_L CHEBI:8806
Resazurin
7 NaHCO3
CHO3.Na 84.006 g/mol
1.99601 G_PER_L CHEBI:32139
sodium hydrogencarbonate
8 2-Mercaptoethanesulfonate
C2H6O3S2 142.201 g/mol
0.139721 G_PER_L CHEBI:17905
coenzyme M
9 Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
2.49501 G_PER_L CHEBI:32150
sodium thiosulfate pentahydrate
10 DL-Dithiothreitol
C4H10O2S2 154.256 g/mol
0.299401 G_PER_L CHEBI:18320
1,4-dithiothreitol
11 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
30 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
12 NaCl
Cl.Na 58.443 g/mol
10 G_PER_L CHEBI:26710
sodium chloride
13 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
1 G_PER_L CHEBI:86158
calcium chloride dihydrate
14 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
0.1 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
15 AlK(SO4)2 x 12 H2O
Al.12H2O.K.2O4S 474.386 g/mol
0.18 G_PER_L CHEBI:86465
potassium aluminium sulfate dodecahydrate
16 H3BO3
H3BO3 61.833 g/mol
0.1 G_PER_L CHEBI:33118
boric acid
17 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.1 G_PER_L CHEBI:75213
sodium molybdate dihydrate
18 (NH4)2Ni(SO4)2 x 6 H2O
6H2O.2H4N.Ni.2O4S 394.987 g/mol
2.8 G_PER_L CHEBI:86149
ammonium nickel sulfate hexahydrate
19 Na2WO4 x 2 H2O
2H2O.2Na.O4W 329.846 g/mol
0.1 G_PER_L CHEBI:63939
sodium tungstate dihydrate
20 Na2SeO4
2Na.O4Se 188.936 g/mol
0.1 G_PER_L CHEBI:77775
sodium selenate
21 p-Aminobenzoic acid
C7H7NO2 137.138 g/mol
0.08 G_PER_L CHEBI:30753
4-aminobenzoic acid
22 D-(+)-biotin
C10H16N2O3S 244.316 g/mol
0.02 G_PER_L CHEBI:15956
biotin
23 Calcium pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.1 G_PER_L CHEBI:31345
Calcium pantothenate

Preparation

  1. Dissolve ingredients (except bicarbonate, coenzyme M, vitamins, thiosulfate, and dithiothreitol), then sparge medium with 80% H2 and 20% CO2 gas mixture for 30 - 45 min to make it anoxic. Dispense medium under the same gas atmosphere into anoxic serum vials (e.g., Balch-type tubes) to 30% of their volume and autoclave. Add coenzyme M, vitamins, thiosulfate, and dithiothreitol from sterile anoxic stock solutions prepared under 100% N2 gas and carbonate from a sterile anoxic stock solution prepared under 80% N2 and 20% CO2 gas atmosphere. The vitamin and dithiothreitol solutions should be sterilized by filtration. Adjust the pH of the complete medium to 6.5.
  2. After inoculation pressurize culture vessels to 1.5 bar overpressure with sterile 80% H2 and 20% CO2 gas mixture.
  3. First adjust pH to 1.0 with diluted H2SO4, then add and dissolve the salts.

Solutions

Wolfe's mineral elixir

Dose: 1 ML_PER_L

Stock composition
IngredientConcentrationNotes
MnSO4 x H2O 5 G_PER_L
FeSO4 x 7 H2O 1 G_PER_L
CoCl2 x 6 H2O 1.8 G_PER_L
ZnSO4 x 7 H2O 1.8 G_PER_L

Seven vitamins solution

Dose: 1 ML_PER_L

Stock composition
IngredientConcentrationNotes
Vitamin B12 0.1 G_PER_L
Nicotinic acid 0.2 G_PER_L
Pyridoxine hydrochloride 0.3 G_PER_L
Thiamine-HCl x 2 H2O 0.2 G_PER_L

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:13.364870Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 1098
2026-03-13T06:18:56.111883Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:000529
2026-03-17T06:29:47.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:07.149829+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "ARCHAEOGLOBUS INFECTUS MEDIUM" to "archaeoglobus_infectus_medium" for consistent matching
2026-06-05T07:40:49.482475+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 27 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:37:34.539830+00:00 primary-term-regrounding-v1.0 Re-grounded wrong primary term id (OAK-verified) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-06-10T07:46:53.444340+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-07T07:05:21.378942+00:00 apply_cocktail_nesting.py NESTED_FLATTENED_COCKTAIL Moved 8 stock-strength component(s) out of ingredients into 2 solution(s): 4 -> "Wolfe's mineral elixir" @ 1 ml/l; 4 -> 'Seven vitamins solution' @ 1 ml/l. Each moved component matched the MediaDive stock by name AND value; bulk ingredients sharing a name were left in place (#150).