acm_medium_for_verminephrobacter

CultureMech:000763 bacterial COMPLEX LIQUID
Original name: ACM-MEDIUM FOR VERMINEPHROBACTER

Overview

External ontology
mediadive.medium:1300 (source link unavailable) — ACM-MEDIUM FOR VERMINEPHROBACTER
Applications
  • Microbial cultivation
pH range
{'min': 7.2, 'max': 7.5}
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1300.pdf

Composition

flowchart LR
    CultureMech_000763["acm_medium_for_verminephrobacter"]
    ing0_Yeast_extract["Yeast extract"]
    CultureMech_000763 --> ing0_Yeast_extract
    ing1_Casamino_acids["Casamino acids"]
    CultureMech_000763 --> ing1_Casamino_acids
    ing2_Na_pyruvate["Na-pyruvate"]
    CultureMech_000763 --> ing2_Na_pyruvate
    CHEBI_50144["CHEBI:50144"]
    ing2_Na_pyruvate -.-> CHEBI_50144
    ing3_L_Glutamine["L-Glutamine"]
    CultureMech_000763 --> ing3_L_Glutamine
    CHEBI_18050["CHEBI:18050"]
    ing3_L_Glutamine -.-> CHEBI_18050
    ing4_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_000763 --> ing4_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing4_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing5_MOPS["MOPS"]
    CultureMech_000763 --> ing5_MOPS
    CHEBI_39074["CHEBI:39074"]
    ing5_MOPS -.-> CHEBI_39074
    ing6_KH2PO4["KH2PO4"]
    CultureMech_000763 --> ing6_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing6_KH2PO4 -.-> CHEBI_63036

Ingredients (7)

# Ingredient Concentration Ontology Notes
1 Yeast extract 0.555556 G_PER_L
2 Casamino acids 0.222222 G_PER_L
3 Na-pyruvate
C3H3O3.Na 110.044 g/mol
0.555556 G_PER_L CHEBI:50144
sodium pyruvate
4 L-Glutamine
C5H10N2O3 146.146 g/mol
0.555556 G_PER_L CHEBI:18050
L-glutamine
5 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.333333 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
6 MOPS 2.22222 G_PER_L CHEBI:39074
MOPS
7 KH2PO4
H2O4P.K 136.084 g/mol
3 G_PER_L CHEBI:63036
potassium dihydrogen phosphate

Preparation

  1. Autoclave solutions A and B separately and combine after cooling. Adjust pH to 7.2 -7.5.
  2. Add Phytagel instead of agar to solidify medium if necessary. Verminephrobacter strains did not grow on plates in our hands.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:14.039614Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 1300
2026-01-28T19:48:32.854454Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T06:18:58.179028Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:000763
2026-03-17T06:30:34.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:09.547190+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "ACM-MEDIUM FOR VERMINEPHROBACTER" to "acm_medium_for_verminephrobacter" for consistent matching
2026-05-20T06:01:07.579578+00:00 migrate_ph_range.py MIGRATED_PH_RANGE ph_range '7.2-7.5' -> {'min': 7.2, 'max': 7.5}
2026-06-05T07:40:47.470562+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-08T23:19:35.518481+00:00 chebi-regrounding-v1.0 Corrected CHEBI ingredient grounding (audit G21/G22) Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI).
2026-06-10T07:46:52.660747+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.