acanthamoeba_medium

CultureMech:000970 bacterial COMPLEX LIQUID
Original name: ACANTHAMOEBA MEDIUM

Overview

External ontology
mediadive.medium:1500 (source link unavailable) — ACANTHAMOEBA MEDIUM
Applications
  • Microbial cultivation
pH
6.5
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1500.pdf Commercial Product: Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Supplier: Multiple suppliers (BD, Sigma, Neogen) Catalog: Multiple (22092 Sigma, 211825 BD) Source: https://en.wikipedia.org/wiki/Tryptic_soy_broth Accessed: 2026-03-28 Constituent composition researched from product specification.

Composition

flowchart LR
    CultureMech_000970["acanthamoeba_medium"]
    ing0_Pancreatic_digest_of_casein["Pancreatic digest of casein"]
    CultureMech_000970 --> ing0_Pancreatic_digest_of_casein
    ing1_Peptic_digest_of_soybean_meal["Peptic digest of soybean meal"]
    CultureMech_000970 --> ing1_Peptic_digest_of_soybean_meal
    ing2_Glucose["Glucose"]
    CultureMech_000970 --> ing2_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing2_Glucose -.-> CHEBI_17234
    ing3_Sodium_chloride["Sodium chloride"]
    CultureMech_000970 --> ing3_Sodium_chloride
    CHEBI_26710["CHEBI:26710"]
    ing3_Sodium_chloride -.-> CHEBI_26710
    ing4_Dipotassium_phosphate["Dipotassium phosphate"]
    CultureMech_000970 --> ing4_Dipotassium_phosphate
    CHEBI_131527["CHEBI:131527"]
    ing4_Dipotassium_phosphate -.-> CHEBI_131527
    ing5_Agar["Agar"]
    CultureMech_000970 --> ing5_Agar
    CHEBI_2509["CHEBI:2509"]
    ing5_Agar -.-> CHEBI_2509
    ing6_Yeast_extract["Yeast extract"]
    CultureMech_000970 --> ing6_Yeast_extract
    ing7_Proteose_peptone["Proteose peptone"]
    CultureMech_000970 --> ing7_Proteose_peptone
    ing8_Glucose["Glucose"]
    CultureMech_000970 --> ing8_Glucose
    ing8_Glucose -.-> CHEBI_17234
    ing9_Sodium_citrate_dihydrate["Sodium citrate dihydrate"]
    CultureMech_000970 --> ing9_Sodium_citrate_dihydrate
    CHEBI_32142["CHEBI:32142"]
    ing9_Sodium_citrate_dihydrate -.-> CHEBI_32142
    ing10_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_000970 --> ing10_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing10_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing11_Na2HPO4_x_7_H2O["Na2HPO4 x 7 H2O"]
    CultureMech_000970 --> ing11_Na2HPO4_x_7_H2O
    CHEBI_34683["CHEBI:34683"]
    ing11_Na2HPO4_x_7_H2O -.-> CHEBI_34683
    ing12_KH2PO4["KH2PO4"]
    CultureMech_000970 --> ing12_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing12_KH2PO4 -.-> CHEBI_63036
    ing13_Fe_NH4_2_SO4_2_x_6_H2O["Fe(NH4)2(SO4)2 x 6 H2O"]
    CultureMech_000970 --> ing13_Fe_NH4_2_SO4_2_x_6_H2O
    CHEBI_76181["CHEBI:76181"]
    ing13_Fe_NH4_2_SO4_2_x_6_H2O -.-> CHEBI_76181
    ing14_Sucrose["Sucrose"]
    CultureMech_000970 --> ing14_Sucrose
    CHEBI_17992["CHEBI:17992"]
    ing14_Sucrose -.-> CHEBI_17992
    ing15_Na2HPO4_x_2_H2O["Na2HPO4 x 2 H2O"]
    CultureMech_000970 --> ing15_Na2HPO4_x_2_H2O
    CHEBI_91258["CHEBI:91258"]
    ing15_Na2HPO4_x_2_H2O -.-> CHEBI_91258
    ing16_Glutamic_acid["Glutamic acid"]
    CultureMech_000970 --> ing16_Glutamic_acid
    CHEBI_18237["CHEBI:18237"]
    ing16_Glutamic_acid -.-> CHEBI_18237

Ingredients (17)

# Ingredient Concentration Ontology Notes
1 Pancreatic digest of casein
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
17.0 G_PER_L MICRO:0000182 (source link unavailable)
tryptone
Pancreatic enzymatic digest of casein providing amino acids and peptides; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
2 Peptic digest of soybean meal
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
3.0 G_PER_L FOODON:03315720
vegetable protein, hydrolyzed
Peptic digest of soybean meal providing additional peptides and carbohydrates; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
3 Glucose
C6H12O6 180.156 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
2.5 G_PER_L CHEBI:17234
glucose
Carbon/energy source; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
4 Sodium chloride
Cl.Na 58.443 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
5.0 G_PER_L CHEBI:26710
sodium chloride
Maintains osmotic equilibrium; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
5 Dipotassium phosphate
HO4P.2K 174.174 g/mol
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
2.5 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
pH buffer; Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
6 Agar
Multiple suppliers (BD, Sigma, Neogen) Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) Multiple (22092 Sigma, 211825 BD)
15.0 G_PER_L CHEBI:2509
agar
Solidifying agent (for TSA only, not in TSB); Constituent of Tryptic Soy Broth (TSB) / Tryptic Soy Agar (TSA) commercial product
7 Yeast extract 12.0 G_PER_L [Merged 2 duplicates: 10.0, 2.0]
8 Proteose peptone 20 G_PER_L
9 Glucose
C6H12O6 180.156 g/mol
18 G_PER_L CHEBI:17234
glucose
10 Sodium citrate dihydrate
C6H5O7.2H2O.3Na 294.099 g/mol
1 G_PER_L CHEBI:32142
sodium citrate dihydrate
11 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.98 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
12 Na2HPO4 x 7 H2O
HO4P.2Na 141.958 g/mol
0.355 G_PER_L CHEBI:34683
disodium hydrogenphosphate
13 KH2PO4
H2O4P.K 136.084 g/mol
0.8600000000000001 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
[Merged 2 duplicates: 0.34, 0.52]
14 Fe(NH4)2(SO4)2 x 6 H2O
Fe.6H2O.2H4N.2O4S 392.139 g/mol
0.02 G_PER_L CHEBI:76181
ferrous ammonium sulfate hexahydrate
15 Sucrose
C12H22O11 342.297 g/mol
75 G_PER_L CHEBI:17992
sucrose
16 Na2HPO4 x 2 H2O
2H2O.HO4P.2Na 177.988 g/mol
1.53 G_PER_L CHEBI:91258
disodium hydrogenphosphate dihydrate
17 Glutamic acid
C5H9NO4 147.13 g/mol
0.75 G_PER_L CHEBI:18237
glutamic acid

Preparation

  1. Media for maintenance of infected amoeba cultures
  2. OR
  3. Adjust pH to 7.3, autoclave at 121°C
  4. Adjust pH to 6.5, autoclave at 110°C or filter-sterilize
  5. Infected amoeba cultures can be maintained e.g. in 25 cm2 flasks (e.g. Nunc flasks, VWR, 734-2081, Thermo-Scientific, 156340) at 20-30°C in an incubator (no special requirements concerning CO2 or light).
  6. Infected Acanthamoeba cultures don't have to be transferred to fresh culture flasks as frequently as usually done for mammalian cell cultures. Amoeba cultures can be maintained in the same flask for several weeks or months. However, if the cultures reach a high cell density, medium should be exchanged. For that purpose amoebae are detached from the surface of the flask by knocking at the culture flask (no trypsin required, amoebae are only weakly adherent compared to most mammalian cells) and the medium (containing the majority of cells) is then completely removed. Fresh medium is added and the few remaining attached amoebae will continue to grow.
  7. Alternatively, cultures can also be passaged regularly (e.g. weekly) by transfer of a small aliquot of a densely grown culture (after cell detachment, as described above) to a fresh flask containing medium.
  8. If cultures contain few attached cells, but high amounts of cell debris, medium should be exchanged without prior cell detachment. Cultures usually recover fast.
  9. Depending on the host cell strain, the bacteria may cause host cell lysis. To maintain such cultures, bacteria have to be transferred by adding culture supernatant (approximately 0.5 ml) to fresh culture flasks containing uninfected host cells (approximately semi-confluent culture) each 7-10 days.
  10. Bacteria released from host cells can be stored in
  11. at -80°C for several months.
  12. Infected cell cultures (supplemented with 10% DMSO) are best stored in liquid nitrogen.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:14.634181Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 1500
2026-01-28T19:48:35.623380Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T03:09:31.038667Z data-quality-cleanup-v1.0 Data quality fixes Merged 2 duplicate ingredient(s)
2026-03-13T06:19:00.059346Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:000970
2026-03-17T06:30:41.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:11.636280+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "ACANTHAMOEBA MEDIUM" to "acanthamoeba_medium" for consistent matching
2026-06-05T07:40:46.587098+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 9 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:52.336470+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.