campylobacter_rectus_medium

CultureMech:001438 bacterial COMPLEX LIQUID
Original name: CAMPYLOBACTER RECTUS MEDIUM

Overview

External ontology
mediadive.medium:338 (source link unavailable) — CAMPYLOBACTER RECTUS MEDIUM
Applications
  • Microbial cultivation
pH
7.5
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium338.pdf

Composition

flowchart LR
    CultureMech_001438["campylobacter_rectus_medium"]
    ing0_Beef_extract["Beef extract"]
    CultureMech_001438 --> ing0_Beef_extract
    ing1_Trypticase["Trypticase"]
    CultureMech_001438 --> ing1_Trypticase
    ing2_Yeast_extract["Yeast extract"]
    CultureMech_001438 --> ing2_Yeast_extract
    ing3_NaCl["NaCl"]
    CultureMech_001438 --> ing3_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing3_NaCl -.-> CHEBI_26710
    ing4_Na2HPO4["Na2HPO4"]
    CultureMech_001438 --> ing4_Na2HPO4
    CHEBI_34683["CHEBI:34683"]
    ing4_Na2HPO4 -.-> CHEBI_34683
    ing5_Na2CO3["Na2CO3"]
    CultureMech_001438 --> ing5_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing5_Na2CO3 -.-> CHEBI_29377
    ing6_Haemin["Haemin"]
    CultureMech_001438 --> ing6_Haemin
    CHEBI_50385["CHEBI:50385"]
    ing6_Haemin -.-> CHEBI_50385
    ing7_Na_formate["Na-formate"]
    CultureMech_001438 --> ing7_Na_formate
    CHEBI_62965["CHEBI:62965"]
    ing7_Na_formate -.-> CHEBI_62965
    ing8_Na_fumarate["Na-fumarate"]
    CultureMech_001438 --> ing8_Na_fumarate
    CHEBI_115156["CHEBI:115156"]
    ing8_Na_fumarate -.-> CHEBI_115156
    ing9_Resazurin["Resazurin"]
    CultureMech_001438 --> ing9_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing9_Resazurin -.-> CHEBI_8806

Ingredients (10)

# Ingredient Concentration Ontology Notes
1 Beef extract 3 G_PER_L
2 Trypticase 9 G_PER_L MICRO:0000175 (source link unavailable)
Trypticase peptone
3 Yeast extract 11 G_PER_L
4 NaCl
Cl.Na 58.443 g/mol
2 G_PER_L CHEBI:26710
sodium chloride
5 Na2HPO4
HO4P.2Na 141.958 g/mol
0.4 G_PER_L CHEBI:34683
disodium hydrogenphosphate
6 Na2CO3
CO3.2Na 105.988 g/mol
0.25 G_PER_L CHEBI:29377
sodium carbonate
7 Haemin
C34H32ClFeN4O4 651.952 g/mol
0.005 G_PER_L CHEBI:50385
hemin
8 Na-formate
CHO2.Na 68.007 g/mol
2 G_PER_L CHEBI:62965
sodium formate
9 Na-fumarate
C4H2O4.2Na 160.036 g/mol
3 G_PER_L CHEBI:115156
disodium fumarate
10 Resazurin
C12H7NO4 229.191 g/mol
0.001 G_PER_L CHEBI:8806
Resazurin

Preparation

  1. Adjust pH to 7.5. Prepare the medium anaerobically under 100% N2.
  2. Autoclave solutions of haemin (dissolved in 0.1 ml 1N NaOH, then diluted with water to 10 ml and neutralized), formate, and fumarate separately under nitrogen.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:10.849826Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 338
2026-01-28T19:48:32.084268Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T06:19:04.203193Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:001438
2026-03-17T06:30:33.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:16.200974+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "CAMPYLOBACTER RECTUS MEDIUM" to "campylobacter_rectus_medium" for consistent matching
2026-06-05T07:40:52.478554+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:54.286326+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-09-22T00:03:26.686152+00:00 repair_rejected_peptone_groundings.py CORRECTED_REJECTED_PEPTONE_GROUNDING CultureMech #484. /ingredients/1/term/id: Trypticase CHEBI:78018 -> MICRO:0000175 (replace_term). Reviewed identities: https://github.com/CultureBotAI/MediaIngredientMech/tree/24562493919391df4468a4285b7c997960cc8868. Publication resolver: MIM label index 9f09e4fb97fb0e6cbbd6f25baca40b36512adb88. MediaDive source IDs and concentrations preserved.
2026-10-07T10:55:41.454416+00:00 codex CURATED_MEDIUM_CONCENTRATION_SOURCE_EVIDENCE Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged.