capnocytophaga_medium

CultureMech:001441 bacterial COMPLEX LIQUID
Original name: CAPNOCYTOPHAGA MEDIUM

Overview

External ontology
mediadive.medium:340 (source link unavailable) — CAPNOCYTOPHAGA MEDIUM
Applications
  • Microbial cultivation
pH
7.0
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium340.pdf

Composition

flowchart LR
    CultureMech_001441["capnocytophaga_medium"]
    ing0_Trypticase["Trypticase"]
    CultureMech_001441 --> ing0_Trypticase
    ing1_Yeast_extract["Yeast extract"]
    CultureMech_001441 --> ing1_Yeast_extract
    ing2_Glucose["Glucose"]
    CultureMech_001441 --> ing2_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing2_Glucose -.-> CHEBI_17234
    ing3_NaCl["NaCl"]
    CultureMech_001441 --> ing3_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing3_NaCl -.-> CHEBI_26710
    ing4_KNO3["KNO3"]
    CultureMech_001441 --> ing4_KNO3
    CHEBI_63043["CHEBI:63043"]
    ing4_KNO3 -.-> CHEBI_63043
    ing5_Haemin["Haemin"]
    CultureMech_001441 --> ing5_Haemin
    CHEBI_50385["CHEBI:50385"]
    ing5_Haemin -.-> CHEBI_50385

Ingredients (6)

# Ingredient Concentration Ontology Notes
1 Trypticase 17 G_PER_L MICRO:0000175 (source link unavailable)
Trypticase peptone
2 Yeast extract 3 G_PER_L
3 Glucose
C6H12O6 180.156 g/mol
3 G_PER_L CHEBI:17234
glucose
4 NaCl
Cl.Na 58.443 g/mol
3 G_PER_L CHEBI:26710
sodium chloride
5 KNO3
K.NO3 101.102 g/mol
3 G_PER_L CHEBI:63043
potassium nitrate
6 Haemin
C34H32ClFeN4O4 651.952 g/mol
0.003 G_PER_L CHEBI:50385
hemin

Preparation

  1. Adjust pH to 7.0.
  2. Sterilize glucose separately. Incubate in oxygen-free, 5 - 10% CO2 containing atmosphere.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:10.854353Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 340
2026-01-28T19:48:24.581122Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T06:19:04.215740Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:001441
2026-03-17T06:30:17.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:16.214097+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "CAPNOCYTOPHAGA MEDIUM" to "capnocytophaga_medium" for consistent matching
2026-06-05T07:40:52.491488+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:37:34.618121+00:00 primary-term-regrounding-v1.0 Re-grounded wrong primary term id (OAK-verified) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-06-10T07:46:54.289232+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-09-22T00:03:26.686152+00:00 repair_rejected_peptone_groundings.py CORRECTED_REJECTED_PEPTONE_GROUNDING CultureMech #484. /ingredients/0/term/id: Trypticase CHEBI:78018 -> MICRO:0000175 (replace_term). Reviewed identities: https://github.com/CultureBotAI/MediaIngredientMech/tree/24562493919391df4468a4285b7c997960cc8868. Publication resolver: MIM label index 9f09e4fb97fb0e6cbbd6f25baca40b36512adb88. MediaDive source IDs and concentrations preserved.
2026-10-07T10:55:41.454416+00:00 codex CURATED_MEDIUM_CONCENTRATION_SOURCE_EVIDENCE Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged.