m13_verrucomicrobium_medium

CultureMech:001735 bacterial COMPLEX LIQUID
Original name: M13 VERRUCOMICROBIUM MEDIUM

Overview

External ontology
mediadive.medium:607 (source link unavailable) — M13 VERRUCOMICROBIUM MEDIUM
Applications
  • Microbial cultivation
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium607.pdf

Composition

flowchart LR
    CultureMech_001735["m13_verrucomicrobium_medium"]
    ing0_Peptone["Peptone"]
    CultureMech_001735 --> ing0_Peptone
    ing1_Yeast_extract["Yeast extract"]
    CultureMech_001735 --> ing1_Yeast_extract
    ing2_Glucose["Glucose"]
    CultureMech_001735 --> ing2_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing2_Glucose -.-> CHEBI_17234
    ing3_Tris_HCl_buffer["Tris-HCl buffer"]
    CultureMech_001735 --> ing3_Tris_HCl_buffer
    CHEBI_9754["CHEBI:9754"]
    ing3_Tris_HCl_buffer -.-> CHEBI_9754
    ing4_NaCl["NaCl"]
    CultureMech_001735 --> ing4_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing4_NaCl -.-> CHEBI_26710
    ing5_Na2SO4["Na2SO4"]
    CultureMech_001735 --> ing5_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing5_Na2SO4 -.-> CHEBI_32149
    ing6_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_001735 --> ing6_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing6_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing7_CaCl2["CaCl2"]
    CultureMech_001735 --> ing7_CaCl2
    CHEBI_3312["CHEBI:3312"]
    ing7_CaCl2 -.-> CHEBI_3312
    ing8_NaHCO3["NaHCO3"]
    CultureMech_001735 --> ing8_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing8_NaHCO3 -.-> CHEBI_32139
    ing9_KCl["KCl"]
    CultureMech_001735 --> ing9_KCl
    CHEBI_32588["CHEBI:32588"]
    ing9_KCl -.-> CHEBI_32588
    ing10_KBr["KBr"]
    CultureMech_001735 --> ing10_KBr
    CHEBI_32030["CHEBI:32030"]
    ing10_KBr -.-> CHEBI_32030
    ing11_H3BO3["H3BO3"]
    CultureMech_001735 --> ing11_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing11_H3BO3 -.-> CHEBI_33118
    ing12_SrCl2["SrCl2"]
    CultureMech_001735 --> ing12_SrCl2
    CHEBI_36383["CHEBI:36383"]
    ing12_SrCl2 -.-> CHEBI_36383
    ing13_NaF["NaF"]
    CultureMech_001735 --> ing13_NaF
    CHEBI_28741["CHEBI:28741"]
    ing13_NaF -.-> CHEBI_28741
    ing14_Vitamin_B12["Vitamin B12"]
    CultureMech_001735 --> ing14_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing14_Vitamin_B12 -.-> CHEBI_176843
    ing15_Biotin["Biotin"]
    CultureMech_001735 --> ing15_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing15_Biotin -.-> CHEBI_15956
    ing16_Thiamine_HCl_x_2_H2O["Thiamine-HCl x 2 H2O"]
    CultureMech_001735 --> ing16_Thiamine_HCl_x_2_H2O
    CHEBI_132751["CHEBI:132751"]
    ing16_Thiamine_HCl_x_2_H2O -.-> CHEBI_132751
    ing17_Calcium_pantothenate["Calcium pantothenate"]
    CultureMech_001735 --> ing17_Calcium_pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing17_Calcium_pantothenate -.-> CHEBI_31345
    ing18_Folic_acid["Folic acid"]
    CultureMech_001735 --> ing18_Folic_acid
    CHEBI_27470["CHEBI:27470"]
    ing18_Folic_acid -.-> CHEBI_27470
    ing19_Riboflavin["Riboflavin"]
    CultureMech_001735 --> ing19_Riboflavin
    CHEBI_17015["CHEBI:17015"]
    ing19_Riboflavin -.-> CHEBI_17015
    ing20_Nicotinamide["Nicotinamide"]
    CultureMech_001735 --> ing20_Nicotinamide
    CHEBI_17154["CHEBI:17154"]
    ing20_Nicotinamide -.-> CHEBI_17154
    ing21_Nitrilotriacetic_acid["Nitrilotriacetic acid"]
    CultureMech_001735 --> ing21_Nitrilotriacetic_acid
    CHEBI_44557["CHEBI:44557"]
    ing21_Nitrilotriacetic_acid -.-> CHEBI_44557
    ing22_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_001735 --> ing22_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing22_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing23_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_001735 --> ing23_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing23_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing24__NH4_6Mo7O24_x_4_H2O["(NH4)6Mo7O24 x 4 H2O"]
    CultureMech_001735 --> ing24__NH4_6Mo7O24_x_4_H2O
    CHEBI_91249["CHEBI:91249"]
    ing24__NH4_6Mo7O24_x_4_H2O -.-> CHEBI_91249
    ing25_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_001735 --> ing25_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing25_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing26_Na_EDTA["Na-EDTA"]
    CultureMech_001735 --> ing26_Na_EDTA
    CHEBI_64734["CHEBI:64734"]
    ing26_Na_EDTA -.-> CHEBI_64734
    ing27_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_001735 --> ing27_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing27_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing28_MnSO4_x_H2O["MnSO4 x H2O"]
    CultureMech_001735 --> ing28_MnSO4_x_H2O
    CHEBI_86364["CHEBI:86364"]
    ing28_MnSO4_x_H2O -.-> CHEBI_86364
    ing29_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_001735 --> ing29_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing29_CuSO4_x_5_H2O -.-> CHEBI_31440
    CultureMech_001735 --> more["...2 more"]

Ingredients (32)

# Ingredient Concentration Ontology Notes
1 Peptone 0.25 G_PER_L
2 Yeast extract 0.25 G_PER_L
3 Glucose
C6H12O6 180.156 g/mol
0.25 G_PER_L CHEBI:17234
glucose
4 Tris-HCl buffer
C4H11NO3 121.136 g/mol
50 G_PER_L CHEBI:9754
tris
5 NaCl
Cl.Na 58.443 g/mol
23.477 G_PER_L CHEBI:26710
sodium chloride
6 Na2SO4
2Na.O4S 142.043 g/mol
3.917 G_PER_L CHEBI:32149
sodium sulfate
7 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
4.981 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
8 CaCl2
Ca.2Cl 110.984 g/mol
1.102 G_PER_L CHEBI:3312
calcium dichloride
9 NaHCO3
CHO3.Na 84.006 g/mol
0.192 G_PER_L CHEBI:32139
sodium hydrogencarbonate
10 KCl
Cl.K 74.551 g/mol
0.664 G_PER_L CHEBI:32588
potassium chloride
11 KBr
Br.K 119.002 g/mol
0.006 G_PER_L CHEBI:32030
potassium bromide
12 H3BO3
H3BO3 61.833 g/mol
0.026 G_PER_L CHEBI:33118
boric acid
13 SrCl2
2Cl.Sr 158.526 g/mol
0.024 G_PER_L CHEBI:36383
strontium dichloride
14 NaF
F.Na 41.988 g/mol
0.003 G_PER_L CHEBI:28741
sodium fluoride
15 Vitamin B12 0.0001 G_PER_L CHEBI:176843
vitamin B12
16 Biotin
C10H16N2O3S 244.316 g/mol
0.002 G_PER_L CHEBI:15956
biotin
17 Thiamine-HCl x 2 H2O
C12H18N4OS.2Cl.2H2O 373.306 g/mol
0.005 G_PER_L CHEBI:132751
thiamine hydrochloride dihydrate
18 Calcium pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.005 G_PER_L CHEBI:31345
Calcium pantothenate
19 Folic acid
C19H19N7O6 441.404 g/mol
0.002 G_PER_L CHEBI:27470
folic acid
20 Riboflavin
C17H20N4O6 376.369 g/mol
0.005 G_PER_L CHEBI:17015
riboflavin
21 Nicotinamide
C6H6N2O 122.127 g/mol
0.005 G_PER_L CHEBI:17154
nicotinamide
22 Nitrilotriacetic acid
C6H9NO6 191.139 g/mol
10 G_PER_L CHEBI:44557
nitrilotriacetic acid
23 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
29.7 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
24 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
3.335 G_PER_L CHEBI:86158
calcium chloride dihydrate
25 (NH4)6Mo7O24 x 4 H2O
2H4N.MoO4 196.014 g/mol
0.00925 G_PER_L CHEBI:91249
ammonium molybdate
26 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
0.599 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
 [Merged 2 duplicates: 0.099, 0.5]
27 Na-EDTA
C10H14N2O8.2Na 336.208 g/mol
0.25 G_PER_L CHEBI:64734
EDTA disodium salt (anhydrous)
28 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
1.095 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
29 MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
0.154 G_PER_L CHEBI:86364
manganese(II) sulfate monohydrate
30 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
0.0392 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
31 Co(NO3)2 x 6 H2O
Co.6H2O.2NO3 291.031 g/mol
0.0248 G_PER_L CHEBI:86214
cobalt dinitrate hexahydrate
32 Na2B4O7 x 10 H2O
10H2O.H4B4O9.2Na 417.401 g/mol
0.0177 G_PER_L CHEBI:131366
disodium tetraborate decahydrate

Preparation

  1. Autoclave at 121°C for 15 min.
  2. Filter-sterilized
  3. Dissolve the nitrilotriacetic acid.
  4. Adjust pH to 7.0 with KOH (~7.3 g).
  5. Dissolve other salts separately and combine.
  6. Adjust pH to 6.8 with NaOH or H2SO4.
  7. Dissolve the EDTA and add a few drops of concentrated H2SO4 to retard precipitation of the heavy metal ions.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:11.713113Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 607
2026-03-13T03:08:49.928955Z data-quality-cleanup-v1.0 Data quality fixes Merged 1 duplicate ingredient(s)
2026-03-13T06:19:06.821564Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:001735
2026-03-17T06:29:53.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:19.047988+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "M13 VERRUCOMICROBIUM MEDIUM" to "m13_verrucomicrobium_medium" for consistent matching
2026-06-05T07:41:11.650304+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 27 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:47:00.644126+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.