sulfophobococcus_zilligii_medium

CultureMech:001904 archaea COMPLEX LIQUID
Original name: SULFOPHOBOCOCCUS ZILLIGII MEDIUM

Overview

External ontology
mediadive.medium:770 (source link unavailable) — SULFOPHOBOCOCCUS ZILLIGII MEDIUM
Applications
  • Microbial cultivation
pH
7.5
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium770.pdf

Composition

flowchart LR
    CultureMech_001904["sulfophobococcus_zilligii_medium"]
    ing0_Na2_EDTA["Na2-EDTA"]
    CultureMech_001904 --> ing0_Na2_EDTA
    CHEBI_64734["CHEBI:64734"]
    ing0_Na2_EDTA -.-> CHEBI_64734
    ing1_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_001904 --> ing1_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing1_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing2_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_001904 --> ing2_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing2_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing3_KCl["KCl"]
    CultureMech_001904 --> ing3_KCl
    CHEBI_32588["CHEBI:32588"]
    ing3_KCl -.-> CHEBI_32588
    ing4_ZnCl2["ZnCl2"]
    CultureMech_001904 --> ing4_ZnCl2
    CHEBI_49976["CHEBI:49976"]
    ing4_ZnCl2 -.-> CHEBI_49976
    ing5_MnSO4_x_H2O["MnSO4 x H2O"]
    CultureMech_001904 --> ing5_MnSO4_x_H2O
    CHEBI_86364["CHEBI:86364"]
    ing5_MnSO4_x_H2O -.-> CHEBI_86364
    ing6_Na2B4O7_x_10_H2O["Na2B4O7 x 10 H2O"]
    CultureMech_001904 --> ing6_Na2B4O7_x_10_H2O
    CHEBI_131366["CHEBI:131366"]
    ing6_Na2B4O7_x_10_H2O -.-> CHEBI_131366
    ing7_Glycine["Glycine"]
    CultureMech_001904 --> ing7_Glycine
    CHEBI_15428["CHEBI:15428"]
    ing7_Glycine -.-> CHEBI_15428
    ing8_Sodium_resazurin["Sodium resazurin"]
    CultureMech_001904 --> ing8_Sodium_resazurin
    CHEBI_8806["CHEBI:8806"]
    ing8_Sodium_resazurin -.-> CHEBI_8806
    ing9_Na2CO3["Na2CO3"]
    CultureMech_001904 --> ing9_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing9_Na2CO3 -.-> CHEBI_29377
    ing10_Yeast_extract["Yeast extract"]
    CultureMech_001904 --> ing10_Yeast_extract
    ing11_Trypticase_peptone["Trypticase peptone"]
    CultureMech_001904 --> ing11_Trypticase_peptone
    ing12_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_001904 --> ing12_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing12_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing13_H2SO4["H2SO4"]
    CultureMech_001904 --> ing13_H2SO4
    CHEBI_26836["CHEBI:26836"]
    ing13_H2SO4 -.-> CHEBI_26836
    ing14_Dithiothreitol["Dithiothreitol"]
    CultureMech_001904 --> ing14_Dithiothreitol
    CHEBI_18320["CHEBI:18320"]
    ing14_Dithiothreitol -.-> CHEBI_18320

Ingredients (15)

# Ingredient Concentration Ontology Notes
1 Na2-EDTA
C10H14N2O8.2Na 336.208 g/mol
0.0329897 G_PER_L CHEBI:64734
EDTA disodium salt (anhydrous)
2 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.0680412 G_PER_L CHEBI:86158
calcium chloride dihydrate
3 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.0319588 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
4 KCl
Cl.K 74.551 g/mol
0.0319588 G_PER_L CHEBI:32588
potassium chloride
5 ZnCl2
2Cl.Zn 136.296 g/mol
0.0021 G_PER_L CHEBI:49976
zinc dichloride
6 MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
0.0023 G_PER_L CHEBI:86364
manganese(II) sulfate monohydrate
7 Na2B4O7 x 10 H2O
10H2O.H4B4O9.2Na 417.401 g/mol
0.0018 G_PER_L CHEBI:131366
disodium tetraborate decahydrate
8 Glycine
C2H5NO2 75.067 g/mol
1.54639 G_PER_L CHEBI:15428
glycine
9 Sodium resazurin
C12H7NO4 229.191 g/mol
0.0005 G_PER_L CHEBI:8806
Resazurin
10 Na2CO3
CO3.2Na 105.988 g/mol
0.237113 G_PER_L CHEBI:29377
sodium carbonate
11 Yeast extract 100 G_PER_L
12 Trypticase peptone 100 G_PER_L
13 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
10 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
14 H2SO4
H2O4S 98.079 g/mol
5 G_PER_L CHEBI:26836
sulfuric acid
15 Dithiothreitol
C4H10O2S2 154.256 g/mol
15 G_PER_L CHEBI:18320
1,4-dithiothreitol

Preparation

  1. Dissolve ingredients of solution A except carbonate, sparge with 100% N2 gas for 30 - 45 min to make it anoxic, then add carbonate and adjust pH to 9.0 - 9.3. Dispense under 100% N2 gas atmosphere into anoxic Hungate-type tubes or serum vials (e.g., 30 ml medium per 100 ml bottle) and autoclave. Solutions B and C are autoclaved separately under 100% N2 gas atmosphere. Solutions D and E are prepared under 100% N2 gas and sterilized by filtration. To complete the medium add appropriate amounts of solutions B to E to the sterile solution A in the sequence as indicated. Adjust pH of complete medium to 7.5.
  2. Note: Addition of 10 - 20 mg sodium dithionite per liter (e.g. from 5% (w/v) solution, freshly prepared under N2 and filter-sterilized) may stimulate growth at the beginning.
  3. For transfers use 10% (v/v) inoculum.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:12.188927Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 770
2026-03-13T06:19:08.289242Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:001904
2026-03-17T06:29:48.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:20.715203+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "SULFOPHOBOCOCCUS ZILLIGII MEDIUM" to "sulfophobococcus_zilligii_medium" for consistent matching
2026-06-05T07:41:47.525624+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:47:12.051843+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.