Overview
- External ontology
- mediadive.medium:78c (source link unavailable) — CHOPPED MEAT MEDIUM FOR FRETIBACTERIUM SP.
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium78c.pdf Commercial Product: LB Medium (Luria-Bertani, Miller formulation) Supplier: Multiple suppliers (Difco, Sigma, etc.) Catalog: Multiple (L3522 Sigma, 244520 BD) Source: https://www.laboratorynotes.com/preparation-of-luria-bertani-lb-miller-broth/ Accessed: 2026-03-28 Constituent composition researched from product specification.
Composition
flowchart LR
CultureMech_001929["chopped_meat_medium_for_fretibacterium_sp"]
ing0_Ground_beef["Ground beef"]
CultureMech_001929 --> ing0_Ground_beef
ing1_NaOH["NaOH"]
CultureMech_001929 --> ing1_NaOH
CHEBI_32145["CHEBI:32145"]
ing1_NaOH -.-> CHEBI_32145
ing2_Casein_peptone["Casein peptone"]
CultureMech_001929 --> ing2_Casein_peptone
ing3_Yeast_extract["Yeast extract"]
CultureMech_001929 --> ing3_Yeast_extract
ing4_K2HPO4["K2HPO4"]
CultureMech_001929 --> ing4_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing4_K2HPO4 -.-> CHEBI_131527
ing5_Sodium_resazurin["Sodium resazurin"]
CultureMech_001929 --> ing5_Sodium_resazurin
CHEBI_8806["CHEBI:8806"]
ing5_Sodium_resazurin -.-> CHEBI_8806
ing6_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
CultureMech_001929 --> ing6_L_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing6_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing7_Na_fumarate["Na-fumarate"]
CultureMech_001929 --> ing7_Na_fumarate
CHEBI_115156["CHEBI:115156"]
ing7_Na_fumarate -.-> CHEBI_115156
ing8_Na_formate["Na-formate"]
CultureMech_001929 --> ing8_Na_formate
CHEBI_62965["CHEBI:62965"]
ing8_Na_formate -.-> CHEBI_62965
ing9_Horse_serum["Horse serum"]
CultureMech_001929 --> ing9_Horse_serum
ing10_DL_Dithiothreitol["DL-Dithiothreitol"]
CultureMech_001929 --> ing10_DL_Dithiothreitol
CHEBI_18320["CHEBI:18320"]
ing10_DL_Dithiothreitol -.-> CHEBI_18320
ing11_Isobutyric_acid["Isobutyric acid"]
CultureMech_001929 --> ing11_Isobutyric_acid
CHEBI_16135["CHEBI:16135"]
ing11_Isobutyric_acid -.-> CHEBI_16135
ing12_Tryptone["Tryptone"]
CultureMech_001929 --> ing12_Tryptone
ing13_Yeast_extract["Yeast extract"]
CultureMech_001929 --> ing13_Yeast_extract
ing14_Sodium_chloride["Sodium chloride"]
CultureMech_001929 --> ing14_Sodium_chloride
CHEBI_26710["CHEBI:26710"]
ing14_Sodium_chloride -.-> CHEBI_26710
ing15_Valeric_acid["Valeric acid"]
CultureMech_001929 --> ing15_Valeric_acid
CHEBI_17418["CHEBI:17418"]
ing15_Valeric_acid -.-> CHEBI_17418
ing16_Isovaleric_acid["Isovaleric acid"]
CultureMech_001929 --> ing16_Isovaleric_acid
CHEBI_28484["CHEBI:28484"]
ing16_Isovaleric_acid -.-> CHEBI_28484
ing17_Haemin["Haemin"]
CultureMech_001929 --> ing17_Haemin
CHEBI_50385["CHEBI:50385"]
ing17_Haemin -.-> CHEBI_50385
ing18_Vitamin_K1["Vitamin K1"]
CultureMech_001929 --> ing18_Vitamin_K1
CHEBI_18067["CHEBI:18067"]
ing18_Vitamin_K1 -.-> CHEBI_18067
ing19_Ethanol["Ethanol"]
CultureMech_001929 --> ing19_Ethanol
CHEBI_16236["CHEBI:16236"]
ing19_Ethanol -.-> CHEBI_16236
ing20_Biotin["Biotin"]
CultureMech_001929 --> ing20_Biotin
CHEBI_15956["CHEBI:15956"]
ing20_Biotin -.-> CHEBI_15956
ing21_Folic_acid["Folic acid"]
CultureMech_001929 --> ing21_Folic_acid
CHEBI_27470["CHEBI:27470"]
ing21_Folic_acid -.-> CHEBI_27470
ing22_Pyridoxine_hydrochloride["Pyridoxine hydrochloride"]
CultureMech_001929 --> ing22_Pyridoxine_hydrochloride
CHEBI_30961["CHEBI:30961"]
ing22_Pyridoxine_hydrochloride -.-> CHEBI_30961
ing23_Thiamine_HCl["Thiamine HCl"]
CultureMech_001929 --> ing23_Thiamine_HCl
CHEBI_49105["CHEBI:49105"]
ing23_Thiamine_HCl -.-> CHEBI_49105
ing24_Riboflavin["Riboflavin"]
CultureMech_001929 --> ing24_Riboflavin
CHEBI_17015["CHEBI:17015"]
ing24_Riboflavin -.-> CHEBI_17015
ing25_Nicotinic_acid["Nicotinic acid"]
CultureMech_001929 --> ing25_Nicotinic_acid
CHEBI_15940["CHEBI:15940"]
ing25_Nicotinic_acid -.-> CHEBI_15940
ing26_Calcium_D_____pantothenate["Calcium D-(+)-pantothenate"]
CultureMech_001929 --> ing26_Calcium_D_____pantothenate
CHEBI_31345["CHEBI:31345"]
ing26_Calcium_D_____pantothenate -.-> CHEBI_31345
ing27_Vitamin_B12["Vitamin B12"]
CultureMech_001929 --> ing27_Vitamin_B12
CHEBI_176843["CHEBI:176843"]
ing27_Vitamin_B12 -.-> CHEBI_176843
ing28_p_Aminobenzoic_acid["p-Aminobenzoic acid"]
CultureMech_001929 --> ing28_p_Aminobenzoic_acid
CHEBI_30753["CHEBI:30753"]
ing28_p_Aminobenzoic_acid -.-> CHEBI_30753
ing29__DL__alpha_Lipoic_acid["(DL)-alpha-Lipoic acid"]
CultureMech_001929 --> ing29__DL__alpha_Lipoic_acid
CHEBI_16494["CHEBI:16494"]
ing29__DL__alpha_Lipoic_acid -.-> CHEBI_16494
Ingredients (30)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Ground beef | 586.166 G_PER_L | ||
| 2 |
NaOH
HO.Na 39.997 g/mol
|
26.0 G_PER_L |
CHEBI:32145
sodium hydroxide
|
[Merged 2 duplicates: 25.0, 1.0] |
| 3 | Casein peptone | 35.17 G_PER_L | ||
| 4 | Yeast extract | 5.86166 G_PER_L | ||
| 5 |
K2HPO4
HO4P.2K 174.174 g/mol
|
5.86166 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 6 |
Sodium resazurin
C12H7NO4 229.191 g/mol
|
0.000586166 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 7 |
L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.586167 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
|
| 8 |
Na-fumarate
C4H2O4.2Na 160.036 g/mol
|
7.034 G_PER_L |
CHEBI:115156
disodium fumarate
|
|
| 9 |
Na-formate
CHO2.Na 68.007 g/mol
|
7.034 G_PER_L |
CHEBI:62965
sodium formate
|
|
| 10 | Horse serum | 50 G_PER_L | ||
| 11 |
DL-Dithiothreitol
C4H10O2S2 154.256 g/mol
|
0.3517 G_PER_L |
CHEBI:18320
1,4-dithiothreitol
|
|
| 12 |
Isobutyric acid
C4H8O2 88.106 g/mol
|
23 G_PER_L |
CHEBI:16135
isobutyric acid
|
|
| 13 |
Tryptone
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
|
10.0 G_PER_L |
MICRO:0000182 (source link unavailable)
tryptone
|
Pancreatic digest of casein providing amino acids, peptides, and nitrogen; Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product |
| 14 |
Yeast extract
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
|
5.0 G_PER_L |
FOODON:03315426
yeast extract
|
Autodigest of Saccharomyces cerevisiae providing vitamins, amino acids, and trace elements; Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product |
| 15 |
Sodium chloride
Cl.Na 58.443 g/mol
Multiple suppliers (Difco, Sigma, etc.) LB Medium (Luria-Bertani, Miller formulation) Multiple (L3522 Sigma, 244520 BD)
|
10.0 G_PER_L |
CHEBI:26710
sodium chloride
|
Maintains osmotic equilibrium (Miller formulation); Constituent of LB Medium (Luria-Bertani, Miller formulation) commercial product |
| 16 |
Valeric acid
C5H10O2 102.133 g/mol
|
27 G_PER_L |
CHEBI:17418
valeric acid
|
|
| 17 |
Isovaleric acid
C5H10O2 102.133 g/mol
|
27 G_PER_L |
CHEBI:28484
isovaleric acid
|
|
| 18 |
Haemin
C34H32ClFeN4O4 651.952 g/mol
|
0.5 G_PER_L |
CHEBI:50385
hemin
|
|
| 19 |
Vitamin K1
C31H46O2 450.707 g/mol
|
0.1 G_PER_L |
CHEBI:18067
phylloquinone
|
|
| 20 |
Ethanol
C2H6O 46.069 g/mol
|
950 G_PER_L |
CHEBI:16236
ethanol
|
|
| 21 |
Biotin
C10H16N2O3S 244.316 g/mol
|
0.02 G_PER_L |
CHEBI:15956
biotin
|
|
| 22 |
Folic acid
C19H19N7O6 441.404 g/mol
|
0.02 G_PER_L |
CHEBI:27470
folic acid
|
|
| 23 |
Pyridoxine hydrochloride
C8H11NO3.HCl 205.641 g/mol
|
0.1 G_PER_L |
CHEBI:30961
pyridoxine hydrochloride
|
|
| 24 |
Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
|
0.05 G_PER_L |
CHEBI:49105
thiamine hydrochloride
|
|
| 25 |
Riboflavin
C17H20N4O6 376.369 g/mol
|
0.05 G_PER_L |
CHEBI:17015
riboflavin
|
|
| 26 |
Nicotinic acid
C6H5NO2 123.111 g/mol
|
0.05 G_PER_L |
CHEBI:15940
nicotinic acid
|
|
| 27 |
Calcium D-(+)-pantothenate
2C9H16NO5.Ca 476.536 g/mol
|
0.05 G_PER_L |
CHEBI:31345
Calcium pantothenate
|
|
| 28 | Vitamin B12 | 0.001 G_PER_L |
CHEBI:176843
vitamin B12
|
|
| 29 |
p-Aminobenzoic acid
C7H7NO2 137.138 g/mol
|
0.05 G_PER_L |
CHEBI:30753
4-aminobenzoic acid
|
|
| 30 |
(DL)-alpha-Lipoic acid
C8H14O2S2 206.332 g/mol
|
0.05 G_PER_L |
CHEBI:16494
lipoic acid
|
Preparation
- Use lean beef or horse meat. Remove fat and connective tissue before grinding. Mix meat, water and NaOH, then boil for 15 min with stirring. Cool to room temperature, skim fat off surface, and filter, retaining both meat particles and filtrate. To the filtrate add Casitone, yeast extract, hydrogen phosphate and resazurin, then add water to a final volume of 700 ml. Sparge medium with 80% N2 and 20% CO2 gas mixture for 30 - 45 min to make it anoxic, then add cysteine and adjust pH to 7.0. Dispense medium under same gas atmosphere into anoxic Hungate-type tubes containing meat particles (use ca. 7 ml liquid medium for 1 - 2 g meat particles), then autoclave at 121°C for 20 min. After autoclaving add fumarate, formate, rumen fluid, horse serum, fatty acids, vitamins, haemin, vitamin K1 and DTT rom sterile anoxic stock solutions prepared under 100% N2 gas atmosphere and sterilized by filtration.
- Rumen fluid from cow or sheep (obtained from fistulated animals or abattoir refuse) is filtered through muslin, autoclaved at 121°C for 15 min and then centrifuged at 27,000 g for 20 min. The supernatant is made anoxic by sparging with 100% N2 gas for 15 min, dispensed under same gas atmosphere into anoxic serum vials to 30% of volume and then stored frozen at -20°C.
- Adjust pH to 7.5 with concentrated NaOH.
- Dissolve 50 mg haemin in 1 ml 1 N NaOH; make up to 100 ml with distilled water and filter sterilize. Store refrigerated.
- Dissolve 0.1 ml of vitamin K1 in 20 ml 95% ethanol and filter sterilize. Store refrigerated in a brown bottle.
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-26T17:53:10.105812Z | mediadive-import | Imported from MediaDive | Source: DSMZ, ID: 78c |
| 2026-02-06T05:10:13.112354Z | invalid-chebi-removal | Removed 1 invalid CHEBI ID(s) | Removed CHEBI IDs with invalid format (7+ digits) from MicrobeMediaParam source data |
| 2026-03-13T03:08:39.390410Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:19:08.509486Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:001929 |
| 2026-03-17T06:29:41.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:20.960230+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "CHOPPED MEAT MEDIUM FOR FRETIBACTERIUM SP." to "chopped_meat_medium_for_fretibacterium_sp" for consistent matching |
| 2026-06-05T07:40:53.498748+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 21 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:54.538472+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |