rumen_fluid_xylan_agar

CultureMech:002495 bacterial COMPLEX SOLID_AGAR
Original name: RUMEN FLUID-XYLAN-AGAR

Overview

External ontology
mediadive.medium:J135 (source link unavailable) — RUMEN FLUID-XYLAN-AGAR
Applications
  • Microbial cultivation
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=135

Composition

flowchart LR
    CultureMech_002495["rumen_fluid_xylan_agar"]
    ing0_K2HPO4["K2HPO4"]
    CultureMech_002495 --> ing0_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing0_K2HPO4 -.-> CHEBI_131527
    ing1_KH2PO4["KH2PO4"]
    CultureMech_002495 --> ing1_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing1_KH2PO4 -.-> CHEBI_63036
    ing2_NaCl["NaCl"]
    CultureMech_002495 --> ing2_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing2_NaCl -.-> CHEBI_26710
    ing3__NH4_2SO4["(NH4)2SO4"]
    CultureMech_002495 --> ing3__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing3__NH4_2SO4 -.-> CHEBI_62946
    ing4_CaCl2["CaCl2"]
    CultureMech_002495 --> ing4_CaCl2
    CHEBI_3312["CHEBI:3312"]
    ing4_CaCl2 -.-> CHEBI_3312
    ing5_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_002495 --> ing5_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing5_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing6_NaHCO3["NaHCO3"]
    CultureMech_002495 --> ing6_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing6_NaHCO3 -.-> CHEBI_32139
    ing7_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
    CultureMech_002495 --> ing7_L_Cysteine_HCl_x_H2O
    CHEBI_91248["CHEBI:91248"]
    ing7_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
    ing8_Na2S_x_9_H2O["Na2S x 9 H2O"]
    CultureMech_002495 --> ing8_Na2S_x_9_H2O
    CHEBI_76209["CHEBI:76209"]
    ing8_Na2S_x_9_H2O -.-> CHEBI_76209
    ing9_Indigo_carmine["Indigo carmine"]
    CultureMech_002495 --> ing9_Indigo_carmine
    CHEBI_31695["CHEBI:31695"]
    ing9_Indigo_carmine -.-> CHEBI_31695
    ing10_Rumen_fluid["Rumen fluid"]
    CultureMech_002495 --> ing10_Rumen_fluid
    ing11_Agar["Agar"]
    CultureMech_002495 --> ing11_Agar
    CHEBI_2509["CHEBI:2509"]
    ing11_Agar -.-> CHEBI_2509
    ing12_Xylan["Xylan"]
    CultureMech_002495 --> ing12_Xylan
    CHEBI_37166["CHEBI:37166"]
    ing12_Xylan -.-> CHEBI_37166

Ingredients (13)

# Ingredient Concentration Ontology Notes
1 K2HPO4
HO4P.2K 174.174 g/mol
0.225 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
2 KH2PO4
H2O4P.K 136.084 g/mol
0.225 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
3 NaCl
Cl.Na 58.443 g/mol
0.45 G_PER_L CHEBI:26710
sodium chloride
4 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.45 G_PER_L CHEBI:62946
ammonium sulfate
5 CaCl2
Ca.2Cl 110.984 g/mol
0.45 G_PER_L CHEBI:3312
calcium dichloride
6 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.09 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
7 NaHCO3
CHO3.Na 84.006 g/mol
6.37 G_PER_L CHEBI:32139
sodium hydrogencarbonate
8 L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
0.25 G_PER_L CHEBI:91248
L-cysteine hydrochloride hydrate
9 Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
0.25 G_PER_L CHEBI:76209
sodium sulfide nonahydrate
10 Indigo carmine
C16H8N2O8S2.2Na 466.36 g/mol
0.005 G_PER_L CHEBI:31695
indigo carmine
11 Rumen fluid 400 G_PER_L
12 Agar 15 G_PER_L CHEBI:2509
agar
13 Xylan 15 G_PER_L CHEBI:37166
xylan

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-26T17:53:15.792249Z mediadive-import Imported from MediaDive Source: JCM, ID: J135
2026-03-13T06:19:13.810198Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:002495
2026-03-17T06:30:35.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:26.974040+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "RUMEN FLUID-XYLAN-AGAR" to "rumen_fluid_xylan_agar" for consistent matching
2026-06-05T07:41:44.801463+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 12 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:47:11.131160+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.