Overview
- External ontology
- komodo.medium:1021_16929 (source link unavailable) — MEDIUM 1021 MODIFIED FOR DSM 16929
- Applications
-
- Microbial cultivation
- Notes
- Source: KOMODO ModelSEED | ID: 1021_16929 | DSMZ Medium: 1021 (mediadive.medium:1021) | Aerobic: No Superseded historical provenance (not a current formulation claim): Commercial Product: LB Medium (Luria-Bertani, Miller formulation) Supplier: Multiple suppliers (Difco, Sigma, etc.) Catalog: Multiple (L3522 Sigma, 244520 BD) Source: https://www.laboratorynotes.com/preparation-of-luria-bertani-lb-miller-broth/ Accessed: 2026-03-28 Constituent composition researched from product specification. The false LB constituent expansion is withdrawn. Each source's actual hydrolysate and preparation scope is retained. Existing unrelated chemical annotations and history are preserved, not recertified; no taxa-media growth association is added. Withdraw the copied pH 8.0 assertion: this variant's own page has no pH value. The linked protocol's Solution A adjustment is not a final variant pH measurement.
Composition
flowchart LR
CultureMech_003533["medium_1021_modified_for_dsm_16929"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_003533 --> ing0_Yeast_extract
ing1_D_Glucose["D-Glucose"]
CultureMech_003533 --> ing1_D_Glucose
CHEBI_17634["CHEBI:17634"]
ing1_D_Glucose -.-> CHEBI_17634
ing2_KCl["KCl"]
CultureMech_003533 --> ing2_KCl
CHEBI_32588["CHEBI:32588"]
ing2_KCl -.-> CHEBI_32588
ing3_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_003533 --> ing3_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing3_MgCl2_x_6_H2O -.-> CHEBI_86345
ing4_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_003533 --> ing4_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing4_CaCl2_x_2_H2O -.-> CHEBI_86158
ing5_NaCl["NaCl"]
CultureMech_003533 --> ing5_NaCl
CHEBI_26710["CHEBI:26710"]
ing5_NaCl -.-> CHEBI_26710
ing6_NaHCO3["NaHCO3"]
CultureMech_003533 --> ing6_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing6_NaHCO3 -.-> CHEBI_32139
ing7_Agar["Agar"]
CultureMech_003533 --> ing7_Agar
CHEBI_2509["CHEBI:2509"]
ing7_Agar -.-> CHEBI_2509
ing8_NaH2PO4_x_2_H2O["NaH2PO4 x 2 H2O"]
CultureMech_003533 --> ing8_NaH2PO4_x_2_H2O
CHEBI_37585["CHEBI:37585"]
ing8_NaH2PO4_x_2_H2O -.-> CHEBI_37585
ing9_casein_hydrolysate["casein hydrolysate"]
CultureMech_003533 --> ing9_casein_hydrolysate
ing10_Distilled_water["Distilled water"]
CultureMech_003533 --> ing10_Distilled_water
ing11_new_borne_calf_serum["new borne calf serum"]
CultureMech_003533 --> ing11_new_borne_calf_serum
ing12_O2["O2"]
CultureMech_003533 --> ing12_O2
ing13_N2["N2"]
CultureMech_003533 --> ing13_N2
ing14_CO2["CO2"]
CultureMech_003533 --> ing14_CO2
Ingredients (15)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 4.96 G_PER_L | The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. | |
| 2 |
D-Glucose
C6H12O6 180.156 g/mol
|
4.00 G_PER_L |
CHEBI:17634
D-glucose
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 3 |
KCl
Cl.K 74.551 g/mol
|
0.20 G_PER_L |
CHEBI:32588
potassium chloride
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 4 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
0.10 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 5 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.20 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 6 |
NaCl
Cl.Na 58.443 g/mol
|
6.96 G_PER_L |
CHEBI:26710
sodium chloride
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 7 |
NaHCO3
CHO3.Na 84.006 g/mol
|
0.12 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 8 | Agar | 13.60 G_PER_L |
CHEBI:2509
agar
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 9 |
NaH2PO4 x 2 H2O
H2O4P.Na 119.976 g/mol
|
0.22 G_PER_L |
CHEBI:37585
sodium dihydrogenphosphate
|
The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. |
| 10 | casein hydrolysate | 6.48 G_PER_L | The KOMODO table explicitly reports Gram Amount per liter of medium. Retain the exact source precision at medium scope, not the previously copied DSMZ stock rate. The separate rounded Mol Amount column is not used for conversion. | |
| 11 | Distilled water | The source lists this component with null Gram and Mol amounts. Its amount is unknown, not zero; no gas fraction, flow rate or fixed water dose is inferred. | ||
| 12 | new borne calf serum | The table's generic Gram/Mol columns show 200.00 and 0.20 for serum; these do not establish density or a chemically meaningful molarity. No numeric concentration is adopted. The linked recipe supplies a 4:1 base/serum preparation ratio. | ||
| 13 | O2 | The source lists this component with null Gram and Mol amounts. Its amount is unknown, not zero; no gas fraction, flow rate or fixed water dose is inferred. | ||
| 14 | N2 | The source lists this component with null Gram and Mol amounts. Its amount is unknown, not zero; no gas fraction, flow rate or fixed water dose is inferred. | ||
| 15 | CO2 | The source lists this component with null Gram and Mol amounts. Its amount is unknown, not zero; no gas fraction, flow rate or fixed water dose is inferred. |
Preparation
- Prepare Solution A according to the linked DSMZ 1021 protocol and adjust Solution A to pH 8.0. This is not a measured final-medium pH.
- For the solid preparation, sterilize Solution A and Solution B separately at 121 C for 20 min. Do not autoclave the serum-supplemented mixture.
- Cool the separately sterilized solutions to 50 C, then combine A and B.
- To 4 parts of the combined basal preparation, add 1 part sterile foetal or newborn calf serum. Preserve the reported ratio; no fixed serum batch dose or mass concentration is asserted.
Target organisms
No target organisms are recorded.
Recipe variants
- Name
- Liquid preparation described by DSMZ 1021
- Relationship
- PHYSICAL_STATE_VARIANT
- Description
- The source describes an alternative liquid preparation but does not provide a separate complete ingredient table.
- Modifications
- Filter sterilize the liquid preparation instead of autoclaving. No membrane pore size is specified.
- The source does not explicitly quantify the agar change for this alternative; no numeric agar amount is invented.
- Evidence
- Reference
- https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1021.pdf
- Supports
- SUPPORT
- Snippet
- Sterilize solution A and B separately at 121C for 20 min. Cool to 50C, then combine. To 4 parts of the above, add 1 part sterile foetal or new borne calf serum. Liquid medium should be filter sterilized instead of autoclaved.
- Explanation
- variants[0].modifications: Preserve the source's conditional liquid preparation, not an invented fully quantified broth recipe. No unstated density, final volume, percent basis or chemical identifier is inferred. Locator=original recipe table/text; accessed=2026-10-08T23:33:46.995198+00:00; capture SHA256=1326bfc6d79f8ed3ad765909aa48d3e4efbb378516ada4a4087710860d8b7cc8.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1021_16929 |
| 2026-02-03T11:19:00.981176 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1021 |
| 2026-03-13T06:19:20.485550Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003533 |
| 2026-03-17T06:29:58.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:34.627829+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MEDIUM 1021 MODIFIED FOR DSM 16929" to "medium_1021_modified_for_dsm_16929" for consistent matching |
| 2026-06-05T07:41:13.563009+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 8 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-10-08T23:50:40.246918+00:00 | codex | RESTORED_SOURCE_SPECIFIC_HYDROLYSATE_FORMULATIONS_WITH_EVIDENCE | Restore source-specific hydrolysates, stock/basal/medium quantity boundaries, missing inputs and preparation; correct unsupported duplicate links. Preserve IDs and prior history. Unknown serum bases/doses and gas amounts remain unknown. |