Overview
- External ontology
- komodo.medium:1178 (source link unavailable) — AQUINCOLA medium
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 1178 | DSMZ Medium: 1178 (mediadive.medium:1178) | Aerobic: No
Composition
flowchart LR
CultureMech_003898["aquincola_medium"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_003898 --> ing0_Yeast_extract
ing1_Peptone["Peptone"]
CultureMech_003898 --> ing1_Peptone
ing2_Fructose["Fructose"]
CultureMech_003898 --> ing2_Fructose
CHEBI_28757["CHEBI:28757"]
ing2_Fructose -.-> CHEBI_28757
ing3_Agar["Agar"]
CultureMech_003898 --> ing3_Agar
CHEBI_2509["CHEBI:2509"]
ing3_Agar -.-> CHEBI_2509
Ingredients (4)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 1 G_PER_L | ||
| 2 | Peptone | 1 G_PER_L | ||
| 3 | Fructose | 0.5 G_PER_L |
CHEBI:28757
fructose
|
|
| 4 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
(for solid medium) |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1178 |
| 2026-02-03T11:19:00.842862 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1178 |
| 2026-03-13T06:19:23.084902Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003898 |
| 2026-03-17T06:29:58.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:37.578634+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "AQUINCOLA medium" to "aquincola_medium" for consistent matching |
| 2026-06-05T07:40:19.593191+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-10-08T08:10:31.707883+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 1178 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |