granulibacter_medium

CultureMech:003906 bacterial COMPLEX SOLID_AGAR
Original name: GRANULIBACTER medium

Overview

External ontology
komodo.medium:1186 (source link unavailable) — GRANULIBACTER medium
Applications
  • Microbial cultivation
Notes
Source: KOMODO ModelSEED | ID: 1186 | DSMZ Medium: 1186 (mediadive.medium:1186) | Aerobic: No

Composition

flowchart LR
    CultureMech_003906["granulibacter_medium"]
    ing0_Glucose["Glucose"]
    CultureMech_003906 --> ing0_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing0_Glucose -.-> CHEBI_17234
    ing1_CaCO3["CaCO3"]
    CultureMech_003906 --> ing1_CaCO3
    CHEBI_3311["CHEBI:3311"]
    ing1_CaCO3 -.-> CHEBI_3311
    ing2_Yeast_extract["Yeast extract"]
    CultureMech_003906 --> ing2_Yeast_extract
    ing3_Agar["Agar"]
    CultureMech_003906 --> ing3_Agar
    CHEBI_2509["CHEBI:2509"]
    ing3_Agar -.-> CHEBI_2509

Ingredients (4)

# Ingredient Concentration Ontology Notes
1 Glucose
C6H12O6 180.156 g/mol
50 G_PER_L CHEBI:17234
glucose
2 CaCO3
CO3.Ca 100.086 g/mol
12.5 G_PER_L CHEBI:3311
calcium carbonate
3 Yeast extract 5 G_PER_L
4 Agar 15 G_PER_L CHEBI:2509
agar
 (for solid medium)

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:01.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 1186
2026-02-03T11:19:09.075830 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 1186
2026-03-13T06:19:23.134730Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:003906
2026-03-17T06:30:23.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:37.636839+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "GRANULIBACTER medium" to "granulibacter_medium" for consistent matching
2026-06-05T07:40:19.645764+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-10-08T08:10:31.707883+00:00 codex CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 1186 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants.