Overview
- External ontology
- komodo.medium:1199.2 (source link unavailable) — For DSM 25088
- Applications
-
- Microbial cultivation
- pH
- 6.5
- Notes
- Source: KOMODO ModelSEED | ID: 1199.2 | DSMZ Medium: 1199 (mediadive.medium:1199) | Aerobic: No
Composition
flowchart LR
CultureMech_003937["for_dsm_25088"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_003937 --> ing0_Yeast_extract
ing1_Distilled_water["Distilled water"]
CultureMech_003937 --> ing1_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing1_Distilled_water -.-> CHEBI_15377
ing2_Glucose["Glucose"]
CultureMech_003937 --> ing2_Glucose
CHEBI_17234["CHEBI:17234"]
ing2_Glucose -.-> CHEBI_17234
ing3_Peptone["Peptone"]
CultureMech_003937 --> ing3_Peptone
Ingredients (4)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 1 G_PER_L | KOMODO Medium 1199.2 lists 1 g/L Yeast extract. | |
| 2 |
Distilled water
H2O 18.015 g/mol
|
variable VARIABLE |
CHEBI:15377
water
|
KOMODO Medium 1199.2 lists distilled water with null gram and molar amounts. |
| 3 |
Glucose
C6H12O6 180.156 g/mol
|
1 G_PER_L |
CHEBI:17234
glucose
|
KOMODO Medium 1199.2 lists 1 g/L Glucose. |
| 4 | Peptone | 1 G_PER_L | KOMODO Medium 1199.2 lists 1 g/L Peptone. |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1199.2 |
| 2026-02-03T11:19:05.342584 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1199 |
| 2026-03-13T06:19:23.434962Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003937 |
| 2026-03-17T06:30:12.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:37.995375+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "For DSM 25088" to "for_dsm_25088" for consistent matching |
| 2026-06-05T07:41:04.097420+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 1 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-09-10T00:00:00-07:00 | repair_komodo_1199_ph_variants_score20.py | RESOLVED_KOMODO_1199_PH_VARIANTS_SCORE20 | KOMODO Medium 1199.2 is a pH 6.5 K7 medium variant for the named DSM strain and has the same KOMODO metabolite table. |