halorubrum_choaviator_medium (CultureMech:003965)

Overview

External ontology

komodo.medium:1214 (source link unavailable) — HALORUBRUM CHOAVIATOR medium

Applications

Microbial cultivation

pH

7.4

High-metal flag

True

Notes

Source: KOMODO ModelSEED | ID: 1214 | DSMZ Medium: 1214 (mediadive.medium:1214) | Aerobic: No

Composition

flowchart LR
    CultureMech_003965["halorubrum_choaviator_medium"]
    ing0_NaCl["NaCl"]
    CultureMech_003965 --> ing0_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing0_NaCl -.-> CHEBI_26710
    ing1_KCl["KCl"]
    CultureMech_003965 --> ing1_KCl
    CHEBI_32588["CHEBI:32588"]
    ing1_KCl -.-> CHEBI_32588
    ing2_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_003965 --> ing2_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing2_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing3_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_003965 --> ing3_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing3_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing4_Yeast_extract["Yeast extract"]
    CultureMech_003965 --> ing4_Yeast_extract
    ing5_Casamino_acids["Casamino acids"]
    CultureMech_003965 --> ing5_Casamino_acids

Ingredients (6)

#	Ingredient	Concentration	Ontology
1	NaCl Cl.Na 58.443 g/mol	200 G_PER_L	CHEBI:26710 sodium chloride
2	KCl Cl.K 74.551 g/mol	2 G_PER_L	CHEBI:32588 potassium chloride
3	CaCl2 x 2 H2O Ca.2Cl.2H2O 147.014 g/mol	0.2 G_PER_L	CHEBI:86158 calcium chloride dihydrate
4	MgCl2 x 6 H2O 2Cl.6H2O.Mg 203.301 g/mol	20 G_PER_L	CHEBI:86345 magnesium dichloride hexahydrate
5	Yeast extract	5 G_PER_L
6	Casamino acids	5 G_PER_L

Target organisms

No target organisms are recorded.

Provenance

Timestamp	Curator	Action	Notes
2026-01-27T01:15:01.fZ	komodo-web-import	Imported from KOMODO web table	Source: KOMODO, ID: 1214
2026-02-03T11:19:01.776332	dsmz-resolver-v1.0	Enriched with DSMZ composition	Copied ingredients from DSMZ Medium 1214
2026-03-13T06:19:23.726576Z	culturemech-id-assigner-v1.0	Assigned CultureMech ID	Assigned stable identifier: CultureMech:003965
2026-03-17T06:30:00.000000Z	mediaingredientmech-enrichment-v1.0	Added MediaIngredientMech links	Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:38.334133+00:00	normalize_media_names_to_snake_case.py	NAME_NORMALIZED	Normalized name from "HALORUBRUM CHOAVIATOR medium" to "halorubrum_choaviator_medium" for consistent matching
2026-06-05T07:40:19.968628+00:00	mim-legacy-to-chebi-migration-v1.0	Refreshed legacy MediaIngredientMech links to CHEBI keying	Replaced 5 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-08T23:19:27.638007+00:00	chebi-regrounding-v1.0	Corrected CHEBI ingredient grounding (audit G21/G22)	Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI).
2026-10-08T08:10:31.707883+00:00	codex	CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE	Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 1214 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants.