roseinatronobacter_monicus_medium

CultureMech:003969 bacterial COMPLEX LIQUID
Original name: ROSEINATRONOBACTER MONICUS medium

Overview

External ontology
komodo.medium:1218 (source link unavailable) — ROSEINATRONOBACTER MONICUS medium
Applications
  • Microbial cultivation
pH range
{'min': 9.0, 'max': 9.5}
Notes
Source: KOMODO ModelSEED | ID: 1218 | DSMZ Medium: 1218 (mediadive.medium:1218) | Aerobic: No

Composition

flowchart LR
    CultureMech_003969["roseinatronobacter_monicus_medium"]
    ing0_NH4Cl["NH4Cl"]
    CultureMech_003969 --> ing0_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing0_NH4Cl -.-> CHEBI_31206
    ing1_KH2PO4["KH2PO4"]
    CultureMech_003969 --> ing1_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing1_KH2PO4 -.-> CHEBI_63036
    ing2_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_003969 --> ing2_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing2_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing3_Na2SO4["Na2SO4"]
    CultureMech_003969 --> ing3_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing3_Na2SO4 -.-> CHEBI_32149
    ing4_NaNO3["NaNO3"]
    CultureMech_003969 --> ing4_NaNO3
    CHEBI_63005["CHEBI:63005"]
    ing4_NaNO3 -.-> CHEBI_63005
    ing5_NaCl["NaCl"]
    CultureMech_003969 --> ing5_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing5_NaCl -.-> CHEBI_26710
    ing6_KCl["KCl"]
    CultureMech_003969 --> ing6_KCl
    CHEBI_32588["CHEBI:32588"]
    ing6_KCl -.-> CHEBI_32588
    ing7_NaHCO3["NaHCO3"]
    CultureMech_003969 --> ing7_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing7_NaHCO3 -.-> CHEBI_32139
    ing8_Na2CO3["Na2CO3"]
    CultureMech_003969 --> ing8_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing8_Na2CO3 -.-> CHEBI_29377
    ing9_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
    CultureMech_003969 --> ing9_Na2S2O3_x_5_H2O
    CHEBI_32150["CHEBI:32150"]
    ing9_Na2S2O3_x_5_H2O -.-> CHEBI_32150
    ing10_Vitamin_B12["Vitamin B12"]
    CultureMech_003969 --> ing10_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing10_Vitamin_B12 -.-> CHEBI_176843
    ing11_Sodium_pyruvate["Sodium pyruvate"]
    CultureMech_003969 --> ing11_Sodium_pyruvate
    CHEBI_50144["CHEBI:50144"]
    ing11_Sodium_pyruvate -.-> CHEBI_50144
    ing12_Sodium_acetate["Sodium acetate"]
    CultureMech_003969 --> ing12_Sodium_acetate
    CHEBI_32954["CHEBI:32954"]
    ing12_Sodium_acetate -.-> CHEBI_32954
    ing13_Peptone["Peptone"]
    CultureMech_003969 --> ing13_Peptone
    ing14_Yeast_extract["Yeast extract"]
    CultureMech_003969 --> ing14_Yeast_extract
    ing15_HCl["HCl"]
    CultureMech_003969 --> ing15_HCl
    CHEBI_17883["CHEBI:17883"]
    ing15_HCl -.-> CHEBI_17883
    ing16_FeCl2_x_4_H2O["FeCl2 x 4 H2O"]
    CultureMech_003969 --> ing16_FeCl2_x_4_H2O
    CHEBI_86249["CHEBI:86249"]
    ing16_FeCl2_x_4_H2O -.-> CHEBI_86249
    ing17_ZnCl2["ZnCl2"]
    CultureMech_003969 --> ing17_ZnCl2
    CHEBI_49976["CHEBI:49976"]
    ing17_ZnCl2 -.-> CHEBI_49976
    ing18_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_003969 --> ing18_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing18_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing19_H3BO3["H3BO3"]
    CultureMech_003969 --> ing19_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing19_H3BO3 -.-> CHEBI_33118
    ing20_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_003969 --> ing20_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing20_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing21_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
    CultureMech_003969 --> ing21_CuCl2_x_2_H2O
    CHEBI_86318["CHEBI:86318"]
    ing21_CuCl2_x_2_H2O -.-> CHEBI_86318
    ing22_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_003969 --> ing22_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing22_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing23_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_003969 --> ing23_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing23_Na2MoO4_x_2_H2O -.-> CHEBI_75213

Ingredients (24)

# Ingredient Concentration Ontology Notes
1 NH4Cl
Cl.H4N 53.492 g/mol
0.4 G_PER_L CHEBI:31206
ammonium chloride
2 KH2PO4
H2O4P.K 136.084 g/mol
0.5 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
3 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
0.2 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
4 Na2SO4
2Na.O4S 142.043 g/mol
0.5 G_PER_L CHEBI:32149
sodium sulfate
5 NaNO3
NO3.Na 84.994 g/mol
0.4 G_PER_L CHEBI:63005
sodium nitrate
6 NaCl
Cl.Na 58.443 g/mol
40 G_PER_L CHEBI:26710
sodium chloride
7 KCl
Cl.K 74.551 g/mol
0.5 G_PER_L CHEBI:32588
potassium chloride
8 NaHCO3
CHO3.Na 84.006 g/mol
10 G_PER_L CHEBI:32139
sodium hydrogencarbonate
9 Na2CO3
CO3.2Na 105.988 g/mol
5 G_PER_L CHEBI:29377
sodium carbonate
10 Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
1 G_PER_L CHEBI:32150
sodium thiosulfate pentahydrate
11 Vitamin B12 1e-05 G_PER_L CHEBI:176843
vitamin B12
12 Sodium pyruvate
C3H3O3.Na 110.044 g/mol
1 G_PER_L CHEBI:50144
sodium pyruvate
13 Sodium acetate
C2H3O2.Na 82.034 g/mol
1 G_PER_L CHEBI:32954
sodium acetate
14 Peptone 1 G_PER_L
15 Yeast extract 1 G_PER_L
16 HCl
HCl 36.461 g/mol
5 G_PER_L CHEBI:17883
hydrogen chloride
17 FeCl2 x 4 H2O
Cl2Fe.4H2O 198.811 g/mol
1.49254 G_PER_L CHEBI:86249
iron dichloride tetrahydrate
18 ZnCl2
2Cl.Zn 136.296 g/mol
0.0696517 G_PER_L CHEBI:49976
zinc dichloride
19 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.199005 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
20 H3BO3
H3BO3 61.833 g/mol
0.00597015 G_PER_L CHEBI:33118
boric acid
21 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.189055 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
22 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.00199005 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
23 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.0238806 G_PER_L CHEBI:34887
nickel dichloride
24 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.0358209 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:01.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 1218
2026-02-03T11:18:56.887321 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 1218
2026-03-13T06:19:23.753307Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:003969
2026-03-17T06:29:46.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:38.364715+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "ROSEINATRONOBACTER MONICUS medium" to "roseinatronobacter_monicus_medium" for consistent matching
2026-05-20T06:00:49.544425+00:00 migrate_ph_range.py MIGRATED_PH_RANGE ph_range '9.0-9.5' -> {'min': 9.0, 'max': 9.5}
2026-06-05T07:40:20.004123+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 21 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:43.845706+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.