Overview
- External ontology
- komodo.medium:214 (source link unavailable) — GYM+S medium
- Applications
-
- Microbial cultivation
- pH
- 7.2
- Notes
- Source: KOMODO ModelSEED | ID: 214 | DSMZ Medium: 214 (mediadive.medium:214) | Aerobic: No
Composition
flowchart LR
CultureMech_004406["gym_s_medium"]
ing0_Glucose["Glucose"]
CultureMech_004406 --> ing0_Glucose
CHEBI_17234["CHEBI:17234"]
ing0_Glucose -.-> CHEBI_17234
ing1_Yeast_extract["Yeast extract"]
CultureMech_004406 --> ing1_Yeast_extract
ing2_Malt_extract["Malt extract"]
CultureMech_004406 --> ing2_Malt_extract
ing3_CaCO3["CaCO3"]
CultureMech_004406 --> ing3_CaCO3
CHEBI_3311["CHEBI:3311"]
ing3_CaCO3 -.-> CHEBI_3311
ing4_Agar["Agar"]
CultureMech_004406 --> ing4_Agar
CHEBI_2509["CHEBI:2509"]
ing4_Agar -.-> CHEBI_2509
ing5_Starch["Starch"]
CultureMech_004406 --> ing5_Starch
CHEBI_28017["CHEBI:28017"]
ing5_Starch -.-> CHEBI_28017
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Glucose
C6H12O6 180.156 g/mol
|
4 G_PER_L |
CHEBI:17234
glucose
|
|
| 2 | Yeast extract | 4 G_PER_L | ||
| 3 | Malt extract | 10 G_PER_L | ||
| 4 |
CaCO3
CO3.Ca 100.086 g/mol
|
2 G_PER_L |
CHEBI:3311
calcium carbonate
|
(if required) |
| 5 | Agar | 12 G_PER_L |
CHEBI:2509
agar
|
|
| 6 | Starch | 20 G_PER_L |
CHEBI:28017
starch
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 214 |
| 2026-02-03T11:19:19.481155 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 214 |
| 2026-03-13T06:19:26.818625Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004406 |
| 2026-03-17T06:30:56.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:41.975655+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "GYM+S medium" to "gym_s_medium" for consistent matching |
| 2026-06-05T07:40:21.734344+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 4 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-10-07T21:02:15.484988+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 214 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |