Overview
- External ontology
- komodo.medium:227 (source link unavailable) — PEDIOCOCCUS HALOPHILUS medium
- Applications
-
- Microbial cultivation
- Notes
- Source: KOMODO ModelSEED | ID: 227 | DSMZ Medium: 227 (mediadive.medium:227) | Aerobic: No
Composition
flowchart LR
CultureMech_004581["pediococcus_halophilus_medium"]
ing0_Casein_peptone["Casein peptone"]
CultureMech_004581 --> ing0_Casein_peptone
ing1_Meat_extract["Meat extract"]
CultureMech_004581 --> ing1_Meat_extract
ing2_Yeast_extract["Yeast extract"]
CultureMech_004581 --> ing2_Yeast_extract
ing3_Glucose["Glucose"]
CultureMech_004581 --> ing3_Glucose
CHEBI_17234["CHEBI:17234"]
ing3_Glucose -.-> CHEBI_17234
ing4_Tween_80["Tween 80"]
CultureMech_004581 --> ing4_Tween_80
CHEBI_53426["CHEBI:53426"]
ing4_Tween_80 -.-> CHEBI_53426
ing5_K2HPO4["K2HPO4"]
CultureMech_004581 --> ing5_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing5_K2HPO4 -.-> CHEBI_131527
ing6_Na_acetate["Na-acetate"]
CultureMech_004581 --> ing6_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing6_Na_acetate -.-> CHEBI_32954
ing7__NH4_3_citrate["(NH4)3 citrate"]
CultureMech_004581 --> ing7__NH4_3_citrate
CHEBI_63037["CHEBI:63037"]
ing7__NH4_3_citrate -.-> CHEBI_63037
ing8_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_004581 --> ing8_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing8_MgSO4_x_7_H2O -.-> CHEBI_31795
ing9_MnSO4_x_H2O["MnSO4 x H2O"]
CultureMech_004581 --> ing9_MnSO4_x_H2O
CHEBI_86364["CHEBI:86364"]
ing9_MnSO4_x_H2O -.-> CHEBI_86364
ing10_NaCl["NaCl"]
CultureMech_004581 --> ing10_NaCl
CHEBI_26710["CHEBI:26710"]
ing10_NaCl -.-> CHEBI_26710
Ingredients (11)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Casein peptone | 10 G_PER_L | ||
| 2 | Meat extract | 10 G_PER_L | ||
| 3 | Yeast extract | 5 G_PER_L | ||
| 4 |
Glucose
C6H12O6 180.156 g/mol
|
20 G_PER_L |
CHEBI:17234
glucose
|
|
| 5 |
Tween 80
(C2H4O)w.(C2H4O)x.(C2H4O)y.(C2H4O)z.C24H44O6 604.822 g/mol
|
1 G_PER_L |
CHEBI:53426
polysorbate 80
|
|
| 6 |
K2HPO4
HO4P.2K 174.174 g/mol
|
2 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 7 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
5 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 8 |
(NH4)3 citrate
C6H5O7.3H4N 243.216 g/mol
|
2 G_PER_L |
CHEBI:63037
triammonium citrate
|
|
| 9 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 10 |
MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
|
0.05 G_PER_L |
CHEBI:86364
manganese(II) sulfate monohydrate
|
|
| 11 |
NaCl
Cl.Na 58.443 g/mol
|
65 G_PER_L |
CHEBI:26710
sodium chloride
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 227 |
| 2026-02-03T11:19:05.532448 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 227 |
| 2026-03-13T06:19:27.503170Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004581 |
| 2026-03-17T06:30:12.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:42.735247+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "PEDIOCOCCUS HALOPHILUS medium" to "pediococcus_halophilus_medium" for consistent matching |
| 2026-06-05T07:41:41.114880+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 8 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:47:09.954330+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-10-07T22:47:39.592416+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 227 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |