Overview
- External ontology
- komodo.medium:281 (source link unavailable) — HYPHOMONAS medium
- Applications
-
- Microbial cultivation
- pH
- 7.5
- Notes
- Source: KOMODO ModelSEED | ID: 281 | DSMZ Medium: 281 (mediadive.medium:281) | Aerobic: No
Composition
flowchart LR
CultureMech_004734["hyphomonas_medium"]
ing0_Casitone["Casitone"]
CultureMech_004734 --> ing0_Casitone
ing1_Yeast_extract["Yeast extract"]
CultureMech_004734 --> ing1_Yeast_extract
ing2_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_004734 --> ing2_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing2_MgCl2_x_6_H2O -.-> CHEBI_86345
Ingredients (3)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Casitone | 2 G_PER_L |
MICRO:0000606 (source link unavailable)
Casitone
|
|
| 2 | Yeast extract | 1 G_PER_L |
FOODON:03315426
Yeast extract
|
|
| 3 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
2 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 281 |
| 2026-02-03T11:18:56.679154 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 281 |
| 2026-03-13T06:19:28.345356Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004734 |
| 2026-03-17T06:29:46.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:43.734652+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "HYPHOMONAS medium" to "hyphomonas_medium" for consistent matching |
| 2026-06-05T07:40:22.102068+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 1 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-09-13T00:00:00-07:00 | repair_komodo_jcm_score10_exact_terms.py | GROUNDED_KOMODO_JCM_SCORE10_EXACT_TERMS | Applied local mappings for Casitone, Yeast extract. |
| 2026-10-07T22:47:39.592416+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 281 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |