Overview
- External ontology
- komodo.medium:305 (source link unavailable) — BACILLUS THERMOGLUCOSIDASIUS medium
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 305 | DSMZ Medium: 305 (mediadive.medium:305) | Aerobic: No
Composition
flowchart LR
CultureMech_004843["bacillus_thermoglucosidasius_medium"]
ing0_Starch["Starch"]
CultureMech_004843 --> ing0_Starch
CHEBI_28017["CHEBI:28017"]
ing0_Starch -.-> CHEBI_28017
ing1_Peptone["Peptone"]
CultureMech_004843 --> ing1_Peptone
ing2_Meat_extract["Meat extract"]
CultureMech_004843 --> ing2_Meat_extract
ing3_Yeast_extract["Yeast extract"]
CultureMech_004843 --> ing3_Yeast_extract
ing4_KH2PO4["KH2PO4"]
CultureMech_004843 --> ing4_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing4_KH2PO4 -.-> CHEBI_63036
ing5_Agar["Agar"]
CultureMech_004843 --> ing5_Agar
CHEBI_2509["CHEBI:2509"]
ing5_Agar -.-> CHEBI_2509
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Starch | 10 G_PER_L |
CHEBI:28017
starch
|
|
| 2 | Peptone | 5 G_PER_L | ||
| 3 | Meat extract | 3 G_PER_L | ||
| 4 | Yeast extract | 3 G_PER_L | ||
| 5 |
KH2PO4
H2O4P.K 136.084 g/mol
|
3 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 6 | Agar | 30 G_PER_L |
CHEBI:2509
agar
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 305 |
| 2026-02-03T11:19:04.163264 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 305 |
| 2026-03-13T06:19:28.888386Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004843 |
| 2026-03-17T06:30:08.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:44.372954+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "BACILLUS THERMOGLUCOSIDASIUS medium" to "bacillus_thermoglucosidasius_medium" for consistent matching |
| 2026-06-05T07:40:22.315173+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.554708+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-10-07T22:47:39.592416+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 305 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |