campylobacter_rectus_medium (CultureMech:005035)

Overview

External ontology

komodo.medium:338 (source link unavailable) — CAMPYLOBACTER RECTUS medium

Applications

Microbial cultivation

pH

7.5

Notes

Source: KOMODO ModelSEED | ID: 338 | DSMZ Medium: 338 (mediadive.medium:338) | Aerobic: Yes

Composition

flowchart LR
    CultureMech_005035["campylobacter_rectus_medium"]
    ing0_Beef_extract["Beef extract"]
    CultureMech_005035 --> ing0_Beef_extract
    ing1_Trypticase["Trypticase"]
    CultureMech_005035 --> ing1_Trypticase
    ing2_Yeast_extract["Yeast extract"]
    CultureMech_005035 --> ing2_Yeast_extract
    ing3_NaCl["NaCl"]
    CultureMech_005035 --> ing3_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing3_NaCl -.-> CHEBI_26710
    ing4_Na2HPO4["Na2HPO4"]
    CultureMech_005035 --> ing4_Na2HPO4
    CHEBI_34683["CHEBI:34683"]
    ing4_Na2HPO4 -.-> CHEBI_34683
    ing5_Na2CO3["Na2CO3"]
    CultureMech_005035 --> ing5_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing5_Na2CO3 -.-> CHEBI_29377
    ing6_Haemin["Haemin"]
    CultureMech_005035 --> ing6_Haemin
    CHEBI_50385["CHEBI:50385"]
    ing6_Haemin -.-> CHEBI_50385
    ing7_Na_formate["Na-formate"]
    CultureMech_005035 --> ing7_Na_formate
    CHEBI_62965["CHEBI:62965"]
    ing7_Na_formate -.-> CHEBI_62965
    ing8_Na_fumarate["Na-fumarate"]
    CultureMech_005035 --> ing8_Na_fumarate
    CHEBI_115156["CHEBI:115156"]
    ing8_Na_fumarate -.-> CHEBI_115156
    ing9_Resazurin["Resazurin"]
    CultureMech_005035 --> ing9_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing9_Resazurin -.-> CHEBI_8806

Ingredients (10)

#	Ingredient	Concentration	Ontology
1	Beef extract	3 G_PER_L
2	Trypticase	9 G_PER_L	MICRO:0000175 (source link unavailable) Trypticase peptone
3	Yeast extract	11 G_PER_L
4	NaCl Cl.Na 58.443 g/mol	2 G_PER_L	CHEBI:26710 sodium chloride
5	Na2HPO4 HO4P.2Na 141.958 g/mol	0.4 G_PER_L	CHEBI:34683 disodium hydrogenphosphate
6	Na2CO3 CO3.2Na 105.988 g/mol	0.25 G_PER_L	CHEBI:29377 sodium carbonate
7	Haemin C34H32ClFeN4O4 651.952 g/mol	0.005 G_PER_L	CHEBI:50385 hemin
8	Na-formate CHO2.Na 68.007 g/mol	2 G_PER_L	CHEBI:62965 sodium formate
9	Na-fumarate C4H2O4.2Na 160.036 g/mol	3 G_PER_L	CHEBI:115156 disodium fumarate
10	Resazurin C12H7NO4 229.191 g/mol	0.001 G_PER_L	CHEBI:8806 Resazurin

Target organisms

No target organisms are recorded.

Provenance

Timestamp	Curator	Action	Notes
2026-01-27T01:15:02.fZ	komodo-web-import	Imported from KOMODO web table	Source: KOMODO, ID: 338
2026-02-03T11:19:11.954156	dsmz-resolver-v1.0	Enriched with DSMZ composition	Copied ingredients from DSMZ Medium 338
2026-03-13T06:19:29.737849Z	culturemech-id-assigner-v1.0	Assigned CultureMech ID	Assigned stable identifier: CultureMech:005035
2026-03-17T06:30:32.000000Z	mediaingredientmech-enrichment-v1.0	Added MediaIngredientMech links	Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:45.354007+00:00	normalize_media_names_to_snake_case.py	NAME_NORMALIZED	Normalized name from "CAMPYLOBACTER RECTUS medium" to "campylobacter_rectus_medium" for consistent matching
2026-06-05T07:40:22.575108+00:00	mim-legacy-to-chebi-migration-v1.0	Refreshed legacy MediaIngredientMech links to CHEBI keying	Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.634643+00:00	primary-term-label-canonicalization-v1.0	Canonicalized primary term label to OBO canonical (OAK)	2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-09-22T00:03:26.686152+00:00	repair_rejected_peptone_groundings.py	CORRECTED_REJECTED_PEPTONE_GROUNDING	CultureMech #484. /ingredients/1/term/id: Trypticase CHEBI:78018 -> MICRO:0000175 (replace_term). Reviewed identities: https://github.com/CultureBotAI/MediaIngredientMech/tree/24562493919391df4468a4285b7c997960cc8868. Publication resolver: MIM label index 9f09e4fb97fb0e6cbbd6f25baca40b36512adb88. MediaDive source IDs and concentrations preserved.