Overview
- External ontology
- komodo.medium:340_7271 (source link unavailable) — MEDIUM 340 MODIFIED FOR DSM 7271
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- Source: KOMODO ModelSEED | ID: 340_7271 | DSMZ Medium: 340 (mediadive.medium:340) | Aerobic: No
Composition
flowchart LR
CultureMech_005048["medium_340_modified_for_dsm_7271"]
ing0_Trypticase["Trypticase"]
CultureMech_005048 --> ing0_Trypticase
ing1_Yeast_extract["Yeast extract"]
CultureMech_005048 --> ing1_Yeast_extract
ing2_Glucose["Glucose"]
CultureMech_005048 --> ing2_Glucose
CHEBI_17234["CHEBI:17234"]
ing2_Glucose -.-> CHEBI_17234
ing3_NaCl["NaCl"]
CultureMech_005048 --> ing3_NaCl
CHEBI_26710["CHEBI:26710"]
ing3_NaCl -.-> CHEBI_26710
ing4_KNO3["KNO3"]
CultureMech_005048 --> ing4_KNO3
CHEBI_63043["CHEBI:63043"]
ing4_KNO3 -.-> CHEBI_63043
ing5_Haemin["Haemin"]
CultureMech_005048 --> ing5_Haemin
CHEBI_50385["CHEBI:50385"]
ing5_Haemin -.-> CHEBI_50385
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Trypticase | 17 G_PER_L |
MICRO:0000175 (source link unavailable)
Trypticase peptone
|
|
| 2 | Yeast extract | 3 G_PER_L | ||
| 3 |
Glucose
C6H12O6 180.156 g/mol
|
3 G_PER_L |
CHEBI:17234
glucose
|
|
| 4 |
NaCl
Cl.Na 58.443 g/mol
|
3 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 5 |
KNO3
K.NO3 101.102 g/mol
|
3 G_PER_L |
CHEBI:63043
potassium nitrate
|
|
| 6 |
Haemin
C34H32ClFeN4O4 651.952 g/mol
|
0.003 G_PER_L |
CHEBI:50385
hemin
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 340_7271 |
| 2026-02-03T11:18:58.316947 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 340 |
| 2026-03-13T06:19:29.776192Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005048 |
| 2026-03-17T06:29:50.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:45.401619+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MEDIUM 340 MODIFIED FOR DSM 7271" to "medium_340_modified_for_dsm_7271" for consistent matching |
| 2026-06-05T07:41:18.415861+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:35.113895+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-06-10T07:47:02.490404+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-09-22T00:03:26.686152+00:00 | repair_rejected_peptone_groundings.py | CORRECTED_REJECTED_PEPTONE_GROUNDING | CultureMech #484. /ingredients/0/term/id: Trypticase CHEBI:78018 -> MICRO:0000175 (replace_term). Reviewed identities: https://github.com/CultureBotAI/MediaIngredientMech/tree/24562493919391df4468a4285b7c997960cc8868. Publication resolver: MIM label index 9f09e4fb97fb0e6cbbd6f25baca40b36512adb88. MediaDive source IDs and concentrations preserved. |