Overview
- External ontology
- komodo.medium:36.1 (source link unavailable) — For DSM 18181
- Applications
-
- Microbial cultivation
- pH
- 7.5
- Notes
- Source: KOMODO ModelSEED | ID: 36.1 | DSMZ Medium: 36 (mediadive.medium:36) | Aerobic: No
Composition
flowchart LR
CultureMech_005082["for_dsm_18181"]
ing0__NH4_2SO4["(NH4)2SO4"]
CultureMech_005082 --> ing0__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing0__NH4_2SO4 -.-> CHEBI_62946
ing1_K2HPO4["K2HPO4"]
CultureMech_005082 --> ing1_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing1_K2HPO4 -.-> CHEBI_131527
ing2_KH2PO4["KH2PO4"]
CultureMech_005082 --> ing2_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing2_KH2PO4 -.-> CHEBI_63036
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_005082 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_CaCl2["CaCl2"]
CultureMech_005082 --> ing4_CaCl2
CHEBI_3312["CHEBI:3312"]
ing4_CaCl2 -.-> CHEBI_3312
ing5_FeCl3_x_6_H2O["FeCl3 x 6 H2O"]
CultureMech_005082 --> ing5_FeCl3_x_6_H2O
CHEBI_86254["CHEBI:86254"]
ing5_FeCl3_x_6_H2O -.-> CHEBI_86254
ing6_MnSO4_x_H2O["MnSO4 x H2O"]
CultureMech_005082 --> ing6_MnSO4_x_H2O
CHEBI_86364["CHEBI:86364"]
ing6_MnSO4_x_H2O -.-> CHEBI_86364
ing7_Agar["Agar"]
CultureMech_005082 --> ing7_Agar
CHEBI_2509["CHEBI:2509"]
ing7_Agar -.-> CHEBI_2509
ing8_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
CultureMech_005082 --> ing8_Na2S2O3_x_5_H2O
CHEBI_32150["CHEBI:32150"]
ing8_Na2S2O3_x_5_H2O -.-> CHEBI_32150
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
0.1 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 2 |
K2HPO4
HO4P.2K 174.174 g/mol
|
4 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 3 |
KH2PO4
H2O4P.K 136.084 g/mol
|
4 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.1 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
CaCl2
Ca.2Cl 110.984 g/mol
|
0.1 G_PER_L |
CHEBI:3312
calcium dichloride
|
|
| 6 |
FeCl3 x 6 H2O
Cl3Fe.6H2O 270.294 g/mol
|
0.02 G_PER_L |
CHEBI:86254
iron trichloride hexahydrate
|
|
| 7 |
MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
|
0.02 G_PER_L |
CHEBI:86364
manganese(II) sulfate monohydrate
|
|
| 8 | Agar | 12 G_PER_L |
CHEBI:2509
agar
|
Optional ingredient (for solid medium) |
| 9 |
Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
|
10 G_PER_L |
CHEBI:32150
sodium thiosulfate pentahydrate
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 36.1 |
| 2026-02-03T11:18:59.191977 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 36 |
| 2026-03-13T06:19:29.997884Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005082 |
| 2026-03-17T06:29:53.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:45.664916+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "For DSM 18181" to "for_dsm_18181" for consistent matching |
| 2026-06-05T07:41:02.938085+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 9 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:57.828919+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-09-13T00:00:00-07:00 | repair_komodo_36_thiobacillus_score10.py | RESOLVED_KOMODO_36_THIOBACILLUS_TOPOLOGY | KOMODO Medium 36.1 applies THIOBACILLUS THIOPARUS MEDIUM at pH 7.5 for DSM 18181. |