dictyoglomus_medium

CultureMech:005165 bacterial COMPLEX LIQUID
Original name: DICTYOGLOMUS medium

Overview

External ontology
komodo.medium:388 (source link unavailable) — DICTYOGLOMUS medium
Applications
  • Microbial cultivation
pH
7.2
Notes
Source: KOMODO ModelSEED | ID: 388 | DSMZ Medium: 388 (mediadive.medium:388) | Aerobic: Yes

Composition

flowchart LR
    CultureMech_005165["dictyoglomus_medium"]
    ing0_KH2PO4["KH2PO4"]
    CultureMech_005165 --> ing0_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing0_KH2PO4 -.-> CHEBI_63036
    ing1_Na2HPO4_x_12_H2O["Na2HPO4 x 12 H2O"]
    CultureMech_005165 --> ing1_Na2HPO4_x_12_H2O
    CHEBI_34683["CHEBI:34683"]
    ing1_Na2HPO4_x_12_H2O -.-> CHEBI_34683
    ing2_NH4Cl["NH4Cl"]
    CultureMech_005165 --> ing2_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing2_NH4Cl -.-> CHEBI_31206
    ing3_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_005165 --> ing3_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing3_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing4_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_005165 --> ing4_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing4_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing5_Fe_NH4_2_SO4_2_x_6_H2O["Fe(NH4)2(SO4)2 x 6 H2O"]
    CultureMech_005165 --> ing5_Fe_NH4_2_SO4_2_x_6_H2O
    CHEBI_76181["CHEBI:76181"]
    ing5_Fe_NH4_2_SO4_2_x_6_H2O -.-> CHEBI_76181
    ing6_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_005165 --> ing6_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing6_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing7_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_005165 --> ing7_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing7_Na2MoO4_x_2_H2O -.-> CHEBI_75213
    ing8_Na2SeO3_x_5_H2O["Na2SeO3 x 5 H2O"]
    CultureMech_005165 --> ing8_Na2SeO3_x_5_H2O
    CHEBI_131361["CHEBI:131361"]
    ing8_Na2SeO3_x_5_H2O -.-> CHEBI_131361
    ing9_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_005165 --> ing9_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing9_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing10_ZnSO4["ZnSO4"]
    CultureMech_005165 --> ing10_ZnSO4
    CHEBI_35176["CHEBI:35176"]
    ing10_ZnSO4 -.-> CHEBI_35176
    ing11_Yeast_extract["Yeast extract"]
    CultureMech_005165 --> ing11_Yeast_extract
    ing12_Polypeptone["Polypeptone"]
    CultureMech_005165 --> ing12_Polypeptone
    ing13_Starch["Starch"]
    CultureMech_005165 --> ing13_Starch
    CHEBI_28017["CHEBI:28017"]
    ing13_Starch -.-> CHEBI_28017
    ing14_Sodium_resazurin["Sodium resazurin"]
    CultureMech_005165 --> ing14_Sodium_resazurin
    CHEBI_8806["CHEBI:8806"]
    ing14_Sodium_resazurin -.-> CHEBI_8806
    ing15_Na2CO3["Na2CO3"]
    CultureMech_005165 --> ing15_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing15_Na2CO3 -.-> CHEBI_29377
    ing16_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
    CultureMech_005165 --> ing16_L_Cysteine_HCl_x_H2O
    CHEBI_91248["CHEBI:91248"]
    ing16_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
    ing17_Biotin["Biotin"]
    CultureMech_005165 --> ing17_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing17_Biotin -.-> CHEBI_15956
    ing18_Folic_acid["Folic acid"]
    CultureMech_005165 --> ing18_Folic_acid
    CHEBI_27470["CHEBI:27470"]
    ing18_Folic_acid -.-> CHEBI_27470
    ing19_Pyridoxine_hydrochloride["Pyridoxine hydrochloride"]
    CultureMech_005165 --> ing19_Pyridoxine_hydrochloride
    CHEBI_30961["CHEBI:30961"]
    ing19_Pyridoxine_hydrochloride -.-> CHEBI_30961
    ing20_Thiamine_HCl["Thiamine HCl"]
    CultureMech_005165 --> ing20_Thiamine_HCl
    CHEBI_49105["CHEBI:49105"]
    ing20_Thiamine_HCl -.-> CHEBI_49105
    ing21_Riboflavin["Riboflavin"]
    CultureMech_005165 --> ing21_Riboflavin
    CHEBI_17015["CHEBI:17015"]
    ing21_Riboflavin -.-> CHEBI_17015
    ing22_Nicotinic_acid["Nicotinic acid"]
    CultureMech_005165 --> ing22_Nicotinic_acid
    CHEBI_15940["CHEBI:15940"]
    ing22_Nicotinic_acid -.-> CHEBI_15940
    ing23_Calcium_D_____pantothenate["Calcium D-(+)-pantothenate"]
    CultureMech_005165 --> ing23_Calcium_D_____pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing23_Calcium_D_____pantothenate -.-> CHEBI_31345
    ing24_Vitamin_B12["Vitamin B12"]
    CultureMech_005165 --> ing24_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing24_Vitamin_B12 -.-> CHEBI_176843
    ing25_p_Aminobenzoic_acid["p-Aminobenzoic acid"]
    CultureMech_005165 --> ing25_p_Aminobenzoic_acid
    CHEBI_30753["CHEBI:30753"]
    ing25_p_Aminobenzoic_acid -.-> CHEBI_30753
    ing26__DL__alpha_Lipoic_acid["(DL)-alpha-Lipoic acid"]
    CultureMech_005165 --> ing26__DL__alpha_Lipoic_acid
    CHEBI_16494["CHEBI:16494"]
    ing26__DL__alpha_Lipoic_acid -.-> CHEBI_16494

Ingredients (27)

# Ingredient Concentration Ontology Notes
1 KH2PO4
H2O4P.K 136.084 g/mol
1.48075 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
2 Na2HPO4 x 12 H2O
HO4P.2Na 141.958 g/mol
4.1461 G_PER_L CHEBI:34683
disodium hydrogenphosphate
3 NH4Cl
Cl.H4N 53.492 g/mol
0.493583 G_PER_L CHEBI:31206
ammonium chloride
4 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
0.375123 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
5 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.05923 G_PER_L CHEBI:86158
calcium chloride dihydrate
6 Fe(NH4)2(SO4)2 x 6 H2O
Fe.6H2O.2H4N.2O4S 392.139 g/mol
0.0394867 G_PER_L CHEBI:76181
ferrous ammonium sulfate hexahydrate
7 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.00286278 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
8 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.0023692 G_PER_L CHEBI:75213
sodium molybdate dihydrate
9 Na2SeO3 x 5 H2O
5H2O.2Na.O3Se 263.012 g/mol
0.000167818 G_PER_L CHEBI:131361
disodium selenite pentahydrate
10 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.00197433 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
11 ZnSO4
O4S.Zn 161.453 g/mol
0.00276407 G_PER_L CHEBI:35176
zinc sulfate
12 Yeast extract 1.97433 G_PER_L
13 Polypeptone 1.97433 G_PER_L
14 Starch 4.93583 G_PER_L CHEBI:28017
starch
15 Sodium resazurin
C12H7NO4 229.191 g/mol
0.000493583 G_PER_L CHEBI:8806
Resazurin
16 Na2CO3
CO3.2Na 105.988 g/mol
0.987167 G_PER_L CHEBI:29377
sodium carbonate
17 L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
0.987167 G_PER_L CHEBI:91248
L-cysteine hydrochloride hydrate
18 Biotin
C10H16N2O3S 244.316 g/mol
0.02 G_PER_L CHEBI:15956
biotin
19 Folic acid
C19H19N7O6 441.404 g/mol
0.02 G_PER_L CHEBI:27470
folic acid
20 Pyridoxine hydrochloride
C8H11NO3.HCl 205.641 g/mol
0.1 G_PER_L CHEBI:30961
pyridoxine hydrochloride
21 Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
0.05 G_PER_L CHEBI:49105
thiamine hydrochloride
22 Riboflavin
C17H20N4O6 376.369 g/mol
0.05 G_PER_L CHEBI:17015
riboflavin
23 Nicotinic acid
C6H5NO2 123.111 g/mol
0.05 G_PER_L CHEBI:15940
nicotinic acid
24 Calcium D-(+)-pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.05 G_PER_L CHEBI:31345
Calcium pantothenate
25 Vitamin B12 0.001 G_PER_L CHEBI:176843
vitamin B12
26 p-Aminobenzoic acid
C7H7NO2 137.138 g/mol
0.05 G_PER_L CHEBI:30753
4-aminobenzoic acid
27 (DL)-alpha-Lipoic acid
C8H14O2S2 206.332 g/mol
0.05 G_PER_L CHEBI:16494
lipoic acid

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 388
2026-02-03T11:18:54.666881 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 388
2026-02-06T05:10:12.681970Z invalid-chebi-removal Removed 1 invalid CHEBI ID(s) Removed CHEBI IDs with invalid format (7+ digits) from MicrobeMediaParam source data
2026-03-13T06:19:30.745076Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005165
2026-03-17T06:29:40.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:46.542472+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "DICTYOGLOMUS medium" to "dictyoglomus_medium" for consistent matching
2026-06-05T07:40:22.942775+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 23 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.760615+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.