nzcym_medium

CultureMech:005973 bacterial COMPLEX LIQUID
Original name: NZCYM-MEDIUM

Overview

External ontology
komodo.medium:544 (source link unavailable) — NZCYM-MEDIUM
Applications
  • Microbial cultivation
pH
7.5
Notes
Source: KOMODO ModelSEED | ID: 544 | DSMZ Medium: 544 (mediadive.medium:544) | Aerobic: No

Composition

flowchart LR
    CultureMech_005973["nzcym_medium"]
    ing0_Casein_hydrolysate["Casein hydrolysate"]
    CultureMech_005973 --> ing0_Casein_hydrolysate
    ing1_NaCl["NaCl"]
    CultureMech_005973 --> ing1_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing1_NaCl -.-> CHEBI_26710
    ing2_Casamino_acids["Casamino acids"]
    CultureMech_005973 --> ing2_Casamino_acids
    ing3_Yeast_extract["Yeast extract"]
    CultureMech_005973 --> ing3_Yeast_extract
    ing4_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_005973 --> ing4_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing4_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing5_Maltose["Maltose"]
    CultureMech_005973 --> ing5_Maltose
    CHEBI_17306["CHEBI:17306"]
    ing5_Maltose -.-> CHEBI_17306

Ingredients (6)

# Ingredient Concentration Ontology Notes
1 Casein hydrolysate 10 G_PER_L
2 NaCl
Cl.Na 58.443 g/mol
5 G_PER_L CHEBI:26710
sodium chloride
3 Casamino acids 1 G_PER_L
4 Yeast extract 5 G_PER_L
5 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
2 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
6 Maltose
C12H22O11 342.297 g/mol
2 G_PER_L CHEBI:17306
maltose

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:03.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 544
2026-02-03T11:18:58.671996 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 544
2026-03-13T06:19:37.415680Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005973
2026-03-17T06:29:51.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:54.175880+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "NZCYM-MEDIUM" to "nzcym_medium" for consistent matching
2026-06-05T07:40:24.526100+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 4 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-08T23:19:28.336735+00:00 chebi-regrounding-v1.0 Corrected CHEBI ingredient grounding (audit G21/G22) Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI).
2026-10-08T03:14:00.696534+00:00 codex CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 544 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants.