Overview
- External ontology
- komodo.medium:545.1 (source link unavailable) — For DSM 22112
- Applications
-
- Microbial cultivation
- pH
- 7.3
- Notes
- Source: KOMODO ModelSEED | ID: 545.1 | DSMZ Medium: 545 (mediadive.medium:545) | Aerobic: Yes
Composition
flowchart LR
CultureMech_005979["for_dsm_22112"]
ing0_Casein_peptone["Casein peptone"]
CultureMech_005979 --> ing0_Casein_peptone
ing1_Soy_peptone["Soy peptone"]
CultureMech_005979 --> ing1_Soy_peptone
ing2_D____Glucose["D(+)-Glucose"]
CultureMech_005979 --> ing2_D____Glucose
CHEBI_17634["CHEBI:17634"]
ing2_D____Glucose -.-> CHEBI_17634
ing3_NaCl["NaCl"]
CultureMech_005979 --> ing3_NaCl
CHEBI_26710["CHEBI:26710"]
ing3_NaCl -.-> CHEBI_26710
ing4_K2HPO4["K2HPO4"]
CultureMech_005979 --> ing4_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing4_K2HPO4 -.-> CHEBI_131527
ing5_Sodium_resazurin["Sodium resazurin"]
CultureMech_005979 --> ing5_Sodium_resazurin
CHEBI_8806["CHEBI:8806"]
ing5_Sodium_resazurin -.-> CHEBI_8806
ing6_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
CultureMech_005979 --> ing6_L_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing6_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing7_Na_thioglycolate["Na-thioglycolate"]
CultureMech_005979 --> ing7_Na_thioglycolate
CHEBI_86481["CHEBI:86481"]
ing7_Na_thioglycolate -.-> CHEBI_86481
Ingredients (8)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Casein peptone | 17 G_PER_L | ||
| 2 | Soy peptone | 3 G_PER_L | ||
| 3 |
D(+)-Glucose
C6H12O6 180.156 g/mol
|
2.5 G_PER_L |
CHEBI:17634
D-glucose
|
|
| 4 |
NaCl
Cl.Na 58.443 g/mol
|
5 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 5 |
K2HPO4
HO4P.2K 174.174 g/mol
|
2.5 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 6 |
Sodium resazurin
C12H7NO4 229.191 g/mol
|
0.0005 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 7 |
L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.3 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
|
| 8 |
Na-thioglycolate
C2H3O2S.Na 114.101 g/mol
|
0.3 G_PER_L |
CHEBI:86481
sodium thioglycolate
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 545.1 |
| 2026-02-03T11:19:02.408019 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 545 |
| 2026-03-13T06:19:37.440810Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:005979 |
| 2026-03-17T06:30:02.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:54.208190+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "For DSM 22112" to "for_dsm_22112" for consistent matching |
| 2026-06-05T07:41:03.752287+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 5 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:58.166748+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-09-13T00:00:00-07:00 | repair_komodo_545_tsb_score10.py | RESOLVED_KOMODO_545_TSB_STRAIN_VARIANT | KOMODO Medium 545.1 preserves TRYPTONE SOYA BROTH components and pH 7.3 but applies the recipe for DSM 22112. |